Detail information of GWHGAAEX007425/evm.TU.scaffold_2.267
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|271964387|ref|YP_003338583.1| | 5.00E-27 | serine/threonine protein kinase [Streptosporangium roseum DSM 43021] |
| KOG | KOG0582 | 0 | Ste20-like serine/threonine protein kinase |
| nr | gi|719964351|ref|XP_010252417.1| | 0 | PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X2 [Nelumbo nucifera] |
| Swissprot | tr|O23304|BLUS1_ARATH | 2.00E-88 | Serine/threonine-protein kinase BLUS1 |
| trEMBL | tr|K7LJZ1|K7LJZ1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G31630.4} |
| TAIR | AT4G24100 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 11229945 | 11295406 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007425
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 280 | 541 | 9.10E-58 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE20-Fray |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.470 |
| SRR2545915 | Juvenile tuber | 9.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.700 |
| SRR5643514 | five period of Gastrodia elata | 6.600 | |
| SRR5643515 | five period of Gastrodia elata | 8.420 | |
| SRR5643524 | five period of Gastrodia elata | 6.800 | |
| SRR5643525 | five period of Gastrodia elata | 12.040 | |
| SRR5643528 | five period of Gastrodia elata | 14.800 | |
| SRR5643658 | five period of Gastrodia elata | 12.510 | |
| SRR5643659 | five period of Gastrodia elata | 7.070 | |
| SRR5643660 | five period of Gastrodia elata | 7.740 | |
| SRR5643661 | five period of Gastrodia elata | 6.710 | |
| SRR5643662 | five period of Gastrodia elata | 7.160 | |
| SRR5643663 | five period of Gastrodia elata | 6.890 | |
| SRR5643664 | five period of Gastrodia elata | 6.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.120 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.270 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.380 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.78 |
| Juven | Juvenile tuber | 10.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.77 | |
| Mother_Juven | Mother tuber of Juvenile | 39.40 |