Detail information of GWHGAAEX007428/evm.TU.scaffold_2.270


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434388384|ref|YP_007098995.1|3.00E-18AAA+ family ATPase [Chamaesiphon minutus PCC 6605]
KOGKOG07431.00E-138AAA+-type ATPase
nrgi|672133836|ref|XP_008790554.1|0PREDICTED: nuclear valosin-containing protein-like [Phoenix dactylifera]
Swissprottr|Q9LET7|CI111_ARATH3.00E-09Calmodulin-interacting protein 111
trEMBLtr|F2CWC1|F2CWC1_HORVD1.00E-168Predicted protein {ECO:0000313|EMBL:BAJ87142.1}
TAIRAT2G466201.00E-138P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101138782711389554-
Transcript Sequence

Network for GWHGAAEX007428

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14363.5AAA_assoc401226.30E-08
PF00004.28AAA2243352.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.070
SRR2545915Juvenile tuber17.280
SRP108465SRR5643513five period of Gastrodia elata42.740
SRR5643514five period of Gastrodia elata51.250
SRR5643515five period of Gastrodia elata44.790
SRR5643524five period of Gastrodia elata40.680
SRR5643525five period of Gastrodia elata67.850
SRR5643528five period of Gastrodia elata66.670
SRR5643658five period of Gastrodia elata53.050
SRR5643659five period of Gastrodia elata25.880
SRR5643660five period of Gastrodia elata24.680
SRR5643661five period of Gastrodia elata30.630
SRR5643662five period of Gastrodia elata32.170
SRR5643663five period of Gastrodia elata31.610
SRR5643664five period of Gastrodia elata58.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.370
SRR6049655Rhizomagastrodiae_C368-T10_good_161.840
SRR6049656Rhizomagastrodiae_C368-T07_good_161.210
SRR6049657Rhizomagastrodiae_C368-T07_good_149.320
SRR6049658Rhizomagastrodiae_C368-T04_good_162.710
SRR6049659Rhizomagastrodiae_C368-T04_good_158.570
SRR6049660Rhizomagastrodiae_C368-T01_good_142.160
SRR6049661Rhizomagastrodiae_C368-T04_good_146.960
SRR6049662Rhizomagastrodiae_C368-T01_good_167.540
SRR6049663Rhizomagastrodiae_C368-T01_good_160.630
SRR6049664Rhizomagastrodiae_C368-T10_good_1106.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1106.340
SRP279888GastroGastrodia elata tuber 27.42
JuvenJuvenile tuber59.60
Mother_GastroMother tuber of Gastrodia elata 209.96
Mother_JuvenMother tuber of Juvenile 176.36