Gene detail

Detail information of GWHGAAEX007431/evm.TU.scaffold_2.274

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|78044373\|ref\|YP_360177.1\|	1.00E-21	serine/threonine protein kinase [Carboxydothermus hydrogenoformans Z-2901]
KOG	KOG0584	0	Serine/threonine protein kinase
nr	gi\|743777724\|ref\|XP_010919301.1\|	0	PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase WNK4 [Elaeis guineensis]
Swissprot	tr\|Q6EU49\|WNK4_ORYSJ	0	Probable serine/threonine-protein kinase WNK4
trEMBL	tr\|M0RWV5\|M0RWV5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P03970_001}
TAIR	AT3G18750	0	with no lysine (K) kinase 6

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	11412222	11418043	-

Transcript Sequence
>GWHTAAEX007431 AAATTAACTTTTGAAAAATATACAAGTGTTTTAAATAAATTAGACTGCTTGAATCAAATTGAACTGGAAGATACAAATAATAATGTTAATAATCATGCCAGACGGTGAAAAAGCTAGTAAGTGTGAGACTAAGCAAATCCATATCACTTCCAAAAAAAATCAATCTTGTCCTTAAAAGTTTTTTTTCTCCTTGTACCAGTGAAGTGCTTATTCCGTCTACATATTCTCTTTGCATTCAATCTATTTCTAACATACTTCTCTTTTGCAGCTCTGTTTTCTCTTTCCAACTTCCGCACCACTCACAATGCACTTATTTTAAATCTGCACAGAAAAACTCATCTTGATTTTCCAGTATCTTATCAAAATTTTACCCATTCTTCTTAACTGCAACACTCACAGTGCACTCGTCTTGAATTTGCCCGCTGAAAATGAGAGGATGGTGAGAGAGGTTGCGGCTGTCTCCCCGGGCGATGAAGAGCAGCAAGGCAGAAAGGAAGCGCGAAACGTCTGGTTAAGCGAAGTTATCCTGTGGAGAAGAAGAGAATCTGCGTAGAACAGGGCTTCGTCTTCGCGACCAAGAGATTGCGGGTGTCTCTCTGGGATATGAAGAGCAGCAAGACAAAAAGGTGGCGCAAAGCGTCTGATCAAGTGAATATGTCCCGTTGAGAAGAAGAGAATCGGCGTACAGCAGGATTTCGTCTTCGCGACAAAAGAGACAGCTCCCCGGGCAATGAAGAGCAGCAAGACGGAAAGAGCATGCAATTAGGTAAAAAGCGGAATGCGAACAGTGGAGGCGGCCTGCTAACTAGGGTTTAACAGGATTTAGTGATTTGTTTTCCGACGTGGCAAAATTTTGTCACGTCGAAAATAATGCGGTTTGTTTGAATATTTGGTTAGTGTTTGCTTTGGTTGAAATTAGGAAGCAGTCGAGAATGAACTGGCATAAAGCTGCCACGCTGGATTACACGTGGCCATCGAACTCAAATAGGAAAGCCCTGAAGCTACGGGCACCGCGAGTATCGCTGGTAAGCCCTAAAACACTGAGAACCGTCGAAAGAGTTAGCGGCTTAGCGCGTTCCCTAAAGCCCTGCGCAGCGTCGAAGGATCGGCTCATTTCTCCTTTTATAGATTTTCCCCCAAAAATTCCCATCTGCTTTTCCTCTCTGCTAGATCTATCGAATTGAATGGCAGCTTTCTCAGAGAATGATTTGATCGGAGAACTATAGCTGTGGTGGCGACTTCTCTGTTCGAAGAATGATTTGCCGACGGGAGGAGGCCGTGGGGGAGGGCTGGGATAGGAATCTGGTCTTCCTTCCGTCGGCTTTCGATTCGTTTTCCGCTGCGTCCGAGGCTTTCTCGGAAAGATTTCGCCAGATTGTGATCTACTAGAGTGCCGCGAGGTACTCTCTCCGTCATTTTTTTTTTTTGTAAGGAATTTTGAGGTGATGGACACTTCACGGAACGGGGTGACGGTGGAAGGGATCAACGGTGGCATTGTCCATTGCTCACCTGATACTGAGTACCTTGAGATGGATCCCATGGGGCGATACGTCCGGTACAAAGATATTTTGGGGAGAGGTGCTTTTAAGACAGTATATAAAGCTTTTGATGAAATCGATGGGATAGAGGTTGCTTGGAATCAAGTTAGAATTGACGAGGCATCTCAGTCTCTACAGAATCTTGGGAGATTATTTTCTGAAGTTCACTTGCTTAAATCTTTGAAACATGATAATATCATCAAATTCTATGATGCATGGGTGGATGATCAAAATAGAACTATAAACATCATAACTGAATTATTTACTTCAGGAAGTTTGAGACAATATCGCCAAAAACATAAAAATGTTGATATGAAGGCAATAAAGAATTGGGCAAGGCAAATTCTTCGAGGTCTAGAATATTTGCATTCCCACAATCCGCCTATTCTTCATAGAGACCTAAAATGCGACAACATTTTTGTTAATGGAAATCACGGTGAAGTTAAAATTGGAGATCTTGGATTAGCCTCTGTCATGGAACAACCTATTGCCCGCAGTGTGATTGGTACTCCTGAGTTTATGGCTCCAGAGCTTTACGATGAGGAGTATAATGAGCTAGCTGATATATATTCTTTCGGCATGTGTATGCTGGAGATGGTAACACTAGAATACCCATACAGTGAATGTAAAAATCCAGCTCAGATTTACAAAAAAGTTACTTCGGGTATCAAGCCTGTTGCACTCAGTAAAGTATCAGACCCTCTGATAAGGGAATTTATTGAGAAATGCTTGGTTAAAGCTTCTGAAAGATTGTCTGTAAAAGAGCTTCTGAAAGATCCTTTCATCCAATGCAACGAACATTCAGGGTTTGATCATGCTTTAAGTCAATTAACAAAGCAAGTTCCTAACGAAACAAAAGCTCAGCCAAGCTGTACCGATGAAGAATTCAACTGCAAGTCACTTCCAACTAGCATTTGTACAAACAACGGCTCTAGGATCTCTGATCTTCAAGCCCTTGAAATTGTGCGAAATAATAGAGGTACTGAATTCAAGCTGAAGGCAGAGCAAGTCGATGATAGCTCAGTAGCACTTGTCCTGCGAATTGCACGTTGCAGTGACAATGCAAGAAATGTTCATTTTACATTTTATCTGGATTCTGATACTGCACATACCGTATCTACCGAAATGGTGGAACAATTAGAATTACCCGATTGTCACGTCGCTTTTATCGCTGATTTCATCGATTCCTTGATTATGAAGCTTGTTCCTAGCTGGAGACCTTCAATAGACAACTCTTCTAATGGGGTCATGATTCCTTTGAAGGAATTTGAGGTCCGAGCTAAAAATGATTCTATAGATAATAACTCTTCTAATGGAATAATCGTTCCCTGGAAGGAACCTGAGGTTGGAACTAAGGAAGAAATTTCACAGCAGTCCCAGTGGAGTGTAATGCCATCTATCATCTCTTCTGTTGATATTGGGATTGATCAAGTTAGTCAGTCTCAACTTGAAGTGGATTCATACAAGAAAGTGGATGAACATATGTGGCATGCAGACTGTAATTCTGTCTCTAGTATTGTAAATTGTGATGATAAATGCTCCCAGGGATCAGCCATGTCTTTAGTTATGACTGCAAGCTGTAAGAGCTTGAATGGATATGCCACAGATATTGATTTGGCGGCTCCAGATTGCTATTCGGCTAAATGTCAAGAAGAAATGAAAATGGAGATTGATGCTATCGAAGCTCAATATGAAAAGTGGTTTAAAGAGCTGTCAAGAATGAAAGAAGAAGCCATTGAAAGCGCCAAAAAGAAGTGGTTGATCAAGAAGAGAGATGGCTAATTCTTTCTCCTCTTCACATGATTTTATTAATTTATTTTTAAATTGATGTGCTGCTTTTTATTTTTATTTTTTATTTTTTAAAAACACACTGTGTTTGCATAAACAAAGCAAAAGGCAAGAGGCTGTACTATTTGCTTCATGCTCAAATCTTGTGCATAGAGTGTTTGAATAAACTGAGGCTCTATGTTTCTTCAAGCTTGAAATATCATGCAAATGTAATAATTTGTATATGATTTGATTGAGACATTAATAATTTTTATGGGTACTGTGAGTTTTACATTGAATGACTATATTTGTTTGACATATAGTGAACTTCTAACAAAAACTCTGTTCAATAAATTGATACTTGTGAAGGTT

Network for GWHGAAEX007431

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	39	293	2.60E-54

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	WNK_NRBP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.720
SRP064423	SRR2545915	Juvenile tuber	18.110
SRP108465	SRR5643513	five period of Gastrodia elata	5.840
	SRR5643514	five period of Gastrodia elata	5.030
	SRR5643515	five period of Gastrodia elata	8.410
	SRR5643524	five period of Gastrodia elata	4.390
	SRR5643525	five period of Gastrodia elata	7.880
	SRR5643528	five period of Gastrodia elata	6.800
	SRR5643658	five period of Gastrodia elata	6.930
	SRR5643659	five period of Gastrodia elata	15.710
	SRR5643660	five period of Gastrodia elata	13.390
	SRR5643661	five period of Gastrodia elata	17.800
	SRR5643662	five period of Gastrodia elata	17.920
	SRR5643663	five period of Gastrodia elata	16.000
	SRR5643664	five period of Gastrodia elata	33.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.980
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.100
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.750
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.040
SRP279888	Gastro	Gastrodia elata tuber	15.49
	Juven	Juvenile tuber	5.46
	Mother_Gastro	Mother tuber of Gastrodia elata	6.66
	Mother_Juven	Mother tuber of Juvenile	3.92