Detail information of GWHGAAEX007434/evm.TU.scaffold_2.280


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|519898600|gb|AGP03755.1|1.47E-37Dof-type zinc finger DNA-binding family protein, partial [Glycine max]
Swissprottr|Q43385|DOF37_ARATH5.00E-35Dof zinc finger protein DOF3.7
trEMBLtr|S4WUL6|S4WUL6_GLYSO5.00E-38Dof-type zinc finger DNA-binding family protein {ECO:0000313|EMBL:AGP03763.1} (Fragment)
TAIRAT3G618502.00E-34Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101147939611480437-
Transcript Sequence

Network for GWHGAAEX007434

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof471034.20E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.900
SRR2545915Juvenile tuber67.190
SRP108465SRR5643513five period of Gastrodia elata9.240
SRR5643514five period of Gastrodia elata30.490
SRR5643515five period of Gastrodia elata34.680
SRR5643524five period of Gastrodia elata25.560
SRR5643525five period of Gastrodia elata167.660
SRR5643528five period of Gastrodia elata186.720
SRR5643658five period of Gastrodia elata260.510
SRR5643659five period of Gastrodia elata59.540
SRR5643660five period of Gastrodia elata46.100
SRR5643661five period of Gastrodia elata52.260
SRR5643662five period of Gastrodia elata58.830
SRR5643663five period of Gastrodia elata42.760
SRR5643664five period of Gastrodia elata38.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.090
SRR6049655Rhizomagastrodiae_C368-T10_good_17.380
SRR6049656Rhizomagastrodiae_C368-T07_good_121.090
SRR6049657Rhizomagastrodiae_C368-T07_good_138.760
SRR6049658Rhizomagastrodiae_C368-T04_good_131.080
SRR6049659Rhizomagastrodiae_C368-T04_good_128.660
SRR6049660Rhizomagastrodiae_C368-T01_good_132.120
SRR6049661Rhizomagastrodiae_C368-T04_good_123.760
SRR6049662Rhizomagastrodiae_C368-T01_good_119.960
SRR6049663Rhizomagastrodiae_C368-T01_good_128.350
SRR6049664Rhizomagastrodiae_C368-T10_good_110.830
SRR6049665Rhizomagastrodiae_C368-T10_good_110.830
SRP279888GastroGastrodia elata tuber 47.77
JuvenJuvenile tuber112.41
Mother_GastroMother tuber of Gastrodia elata 62.31
Mother_JuvenMother tuber of Juvenile 20.48