Gene detail

Detail information of GWHGAAEX007437/evm.TU.scaffold_2.284

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743828418\|ref\|XP_010933856.1\|	0	PREDICTED: uncharacterized protein LOC105054121 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0RP11\|M0RP11_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P03310_001}
TAIR	AT5G06970	1.00E-131	Protein of unknown function (DUF810)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	11559297	11658641	-

Transcript Sequence
>GWHTAAEX007437 AGCCTAAAAGATAGGATCGAAGGAGAGAGCGAGCGCACGTTCGATGGACTTATCTTTTACGCTCCAACGATTTCGCAGTGATCGCCGCAAACTTCTAGAATTTATCTTCTCTTCAGGGTTAATTAAGGGCCCCTCTGGCAGTGCATTTGATTTGTCAGATTTGAACTTGGATGCCGTCAACACGGACTACGTACTTAGTTGCGCCAAATCAAGCAAAGCTTTTGTTCCCAATGAGGCTACAGAGAGGTATTATACTGGGTTGGATTTGCCAATCATGATAAATTTACCGTCCAGAAAATCTTTCTTTCTTCTTTCAAAACCAGATCTATTGGAAGCCCCTCCTGAACGAGTACCTCCTATGATGGTAGGGGATAATACAACCGACGATCATTTTTTAAGTGCAACTTCAGTTGACATAGGAGCTACGATGGATATTCCTGATTTAAAAATGAATAATTTAGCTCCAAATACTTCACAATGCCGGCCAACAAAAGATGTGAAACTTTCTATTGGATTGCCCTCTTTTCGAACTGGGCTCTCTGATGATGATATGCGTGAAACAGCCTATGAGGTGCTTCTTGCTTCTGTTGCACACTCTGGGGGACATAAACCCAATTTTGAGGGAAAAAAGAAGGAACGTAAATCAAATTTCTTGAAGGGGTTGAAACATAAGAGGGAGGGCTCACATTTTCGCTTAGATGAGTCTCGTTCTGATTTGATGGATATAATCCGTGGGCAATTAGAGATTTCGGAAGCAATGGATGCGTGGACTAAAAAAGGCTTAAGGAACTTTTGTTTGCGATCCATGCCAAGTCGCGCTGATGTTCCACAAATAGCTTTAGAACTTTTAGGTTCCCTTTCCAGGTCAGATTTTCCCTCGGAAAAGTTTTATACACAATGGCAGAGGAGACAGGCAGATATACTCGAAGAACTGCTTATAGATCCAAATAACTCTGTTGCCAGTGAGCAGCAAATGCTCTCTTATCTTCTGTCAAATATAAGGAATTCAGAGGAATGGTCAAATTTGTCTCATGAGGTGCACATTGATACCCTGGATTGGATAGGAAAATTCATTTCTAGGATGGCCAATATGCCTGAAAAATTTGGTGTTTCAGATGTTGCCTATTTTTGGACAGGCAGTTACTGCTTTACTGTGAAACTTTATGAGAAATTACTCAACAGTGTTTTTGATATCCTAGAAGATGGTCAGATTGTAGAGGAAGCTGAAGAAATCCTTGGTGTTTTGAGGATGACCTGGTCTATGTTAGGTGTTACTCAGATGATGCATGATACTTTATATGGTTGGGCACTTTTTCAGCAGTTTGTTCAAACAGGAGATTTTTCACTGCTGAAATGCACAATCGTGGAAATTCAAAATATTTTATCCAATATGCATGGCAATGGCGAAACTTTGTGTGCAGATATTGTTTGTTCAGTTGACGCCTGTGGCTGTAGAAGAGATTTAAATATGGTTGATGCTGTTCTTCTTAACATCTTCTTTTGGTGTAGCACTCAACTAGAAGATTACCATTTTCGTTTTTCCTTGGATGATTTTCAGATTTTTGAGAGCATTCTGACCCTGGCAATACTCTTGGGTACAAGGTTTTCTAATGAAATTTTAGAAGCAAAGACCACTTATCTTTCTCATACTTCTCTAGAGCTTGAGGTTGAAAATGGAGTTAATTTCAAGTTAATCCGATTATTTATTTGGATGTCTATTCAAGGATCACTTAAGCGGACCCAAGATGATGTGGTTGCCAAGTCTAAGATTGAACAAAAGCATCCTTTGGCCCTACTCGCCATGGAATTGAAGTTGTTTGCTGAGAAAGAGCAGACTTTGTTTACCCCAATATTATGTCGGCAAAATTCAATGGCTGGGATTGTTTTTTCTGTTATCCTCCATCGGTACTATTGGGAACTTCTGAAGCCTTTTCTGGAGAGAATATCTGGTTTCTCAGAATGTGCAATCGAAGTGCTTTCAGCATCTTATAGTTTAGAGTGCTGCCTGGTTCATTTAATCAAGTCTACAAGCGGTGAGAGAAAATCAATTCCTATCACTACGTACCTTGATACCTACCAGATAAGACCTGTCAGTGCACCACTTATTCTTCATATGGTGAATTCTCGACACGAGAAGATCATGGGATGGACAGAACGTGCTATCCTTATAGAGAATTGGGACCCTTTGTCATCCCAACAGAAACAAGCAAGATCTGTTATTGAAGTATTTCGAATCATCCATGAGGCTATCAATCAATTCTTTGATTTGAGACTCCCTATGGAAACCATCCACTTGCGATCTTTACTCATTGGGGTTGTTAGAAGCCTTGAAGCTTATTTGCAGAGCATAATCAGTCAGCAAATTGATAAGAACATTTTATTTCCCAGCGCTCCCACATTAACAAGATACAAAGAGTCAGTCAATCCCTTCTTGAAGAAAAAACCGGTGGAATGTGCTACAGTAGATGAGAAAGTAGTCAGTCAGCTTGACAATTTGACAGTACCTAAATTGTGTGTTAAGCTCAACACACTCAAATACATTCGGGACCAACTTGATGAATTGGAAGCTTCCATAAAGCAGTCTTGGGTGAATATTCAAACTGCTGATCAATATATATATGGACATAACAAGGATGAAGGCACGTCCTCTAGTGAATCTGTTGATGAGCTTTTTTCTGTATTTGATGATGTAAGAGCAAGCGCTGTTGGTGCAACTGATGCGATTCTTGAGTTTATTGGAATACGAACCATTTTCTGGGATATGAGAAAAACATTTATTAGTTCCTTGTACCAAGGTGGGGTTAATAGAGTTCGATTGGAAAATTTTCTCCCCGAACTAGATAAAGTACTCGATCGTATATGTGATTTAATCATAGATGAATTTCGAGACTATGTTGCCTTGAGCATATGCAAAACATCAATGACAGGCTTTATTTGGGTTCTGCTGGATGGAGGCCCTTCCCGTGCGTTCTCTTACACAGATGTAGAAATTTTACTTGAAGATCTAAATATGCTAAAGGATTTATTTGAAGCAAATGGTCAAGGTATTCATCGTGATGTTATCAAGGAAGAAGCAAAAGTAGCTGAAAAGATCATAGAGTTATACAGCTTGAAGGCTGAAACAATAGTTAATAAACTGATTAATTCAAGTGAACAACTTTATCACCAACATGATCACAAGAAACCTGGAACCAGGGGTGCAGAAGATGCTGATACTTTTCTGAGGGTCCTGTGTCATATGAAAGAAGAAACTGCTTCAGAATTTTTGAGAGTTCGATATCAACTTCCCAAGTCTTCAGATTACGATGAAATTTATGGATATGAGACGGATGAATCTGCAAAATCATCGCCCCTTCTATCGAACTTACTGAAGGGCAGCGCATCAAGCAGCAGGTGGACGGAAACAGGGCAGAGAGGTCTGAGTATTATGAAGAAAAAATTTCAGGAGGCTACATCCGAATGGTAATTTCTTTTTCTTTCTTTTTTACTTATCTTAGGCTTTTGTTTTCAGCATTTTATTGTACAGATGAATGACACGTGGAGGTCGTAGAACGCATATGATTTTTCTTACTGGATTTTATATTTTTTGAAATATAATTATATGGATGAAGTTGTAAAGTGTAACCTTCAAATTTCATCGGGAAAACCCTTTAACTGCAGATGAATGATACTAATAATAATAATAATTTTGTAAACACACTTGAATGCAGCATATTACAAACTT

Network for GWHGAAEX007437

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05664.10	DUF810	165	841	2.60E-179

Protein Sequence

>GWHPAAEX007437
MDLSFTLQRFRSDRRKLLEFIFSSGLIKGPSGSAFDLSDLNLDAVNTDYVLSCAKSSKAFVPNEATERYYTGLDLPIMINLPSRKSFFLLSKPDLLEAPPERVPPMMVGDNTTDDHFLSATSVDIGATMDIPDLKMNNLAPNTSQCRPTKDVKLSIGLPSFRTGLSDDDMRETAYEVLLASVAHSGGHKPNFEGKKKERKSNFLKGLKHKREGSHFRLDESRSDLMDIIRGQLEISEAMDAWTKKGLRNFCLRSMPSRADVPQIALELLGSLSRSDFPSEKFYTQWQRRQADILEELLIDPNNSVASEQQMLSYLLSNIRNSEEWSNLSHEVHIDTLDWIGKFISRMANMPEKFGVSDVAYFWTGSYCFTVKLYEKLLNSVFDILEDGQIVEEAEEILGVLRMTWSMLGVTQMMHDTLYGWALFQQFVQTGDFSLLKCTIVEIQNILSNMHGNGETLCADIVCSVDACGCRRDLNMVDAVLLNIFFWCSTQLEDYHFRFSLDDFQIFESILTLAILLGTRFSNEILEAKTTYLSHTSLELEVENGVNFKLIRLFIWMSIQGSLKRTQDDVVAKSKIEQKHPLALLAMELKLFAEKEQTLFTPILCRQNSMAGIVFSVILHRYYWELLKPFLERISGFSECAIEVLSASYSLECCLVHLIKSTSGERKSIPITTYLDTYQIRPVSAPLILHMVNSRHEKIMGWTERAILIENWDPLSSQQKQARSVIEVFRIIHEAINQFFDLRLPMETIHLRSLLIGVVRSLEAYLQSIISQQIDKNILFPSAPTLTRYKESVNPFLKKKPVECATVDEKVVSQLDNLTVPKLCVKLNTLKYIRDQLDELEASIKQSWVNIQTADQYIYGHNKDEGTSSSESVDELFSVFDDVRASAVGATDAILEFIGIRTIFWDMRKTFISSLYQGGVNRVRLENFLPELDKVLDRICDLIIDEFRDYVALSICKTSMTGFIWVLLDGGPSRAFSYTDVEILLEDLNMLKDLFEANGQGIHRDVIKEEAKVAEKIIELYSLKAETIVNKLINSSEQLYHQHDHKKPGTRGAEDADTFLRVLCHMKEETASEFLRVRYQLPKSSDYDEIYGYETDESAKSSPLLSNLLKGSASSSRWTETGQRGLSIMKKKFQEATSEW

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.280
SRP064423	SRR2545915	Juvenile tuber	13.140
SRP108465	SRR5643513	five period of Gastrodia elata	5.860
	SRR5643514	five period of Gastrodia elata	5.730
	SRR5643515	five period of Gastrodia elata	6.060
	SRR5643524	five period of Gastrodia elata	6.190
	SRR5643525	five period of Gastrodia elata	7.240
	SRR5643528	five period of Gastrodia elata	5.820
	SRR5643658	five period of Gastrodia elata	6.060
	SRR5643659	five period of Gastrodia elata	6.070
	SRR5643660	five period of Gastrodia elata	7.190
	SRR5643661	five period of Gastrodia elata	6.450
	SRR5643662	five period of Gastrodia elata	6.950
	SRR5643663	five period of Gastrodia elata	7.870
	SRR5643664	five period of Gastrodia elata	7.310
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.920
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.090
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.970
SRP279888	Gastro	Gastrodia elata tuber	9.96
	Juven	Juvenile tuber	16.19
	Mother_Gastro	Mother tuber of Gastrodia elata	11.23
	Mother_Juven	Mother tuber of Juvenile	16.00