Detail information of GWHGAAEX007443/evm.TU.scaffold_2.290


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672204784|ref|XP_008779007.1|6.13E-152PREDICTED: F-box protein PP2-A13-like [Phoenix dactylifera]
Swissprottr|Q9LEX0|P2A13_ARATH3.00E-115F-box protein PP2-A13
trEMBLtr|M0SVA9|M0SVA9_MUSAM6.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P03300_001}
TAIRAT3G610601.00E-114phloem protein 2-A13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101187994011883481+
Transcript Sequence

Network for GWHGAAEX007443

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box24630.00067
PF14299.5PP21192763.10E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.270
SRR2545915Juvenile tuber16.410
SRP108465SRR5643513five period of Gastrodia elata10.890
SRR5643514five period of Gastrodia elata10.710
SRR5643515five period of Gastrodia elata16.730
SRR5643524five period of Gastrodia elata9.710
SRR5643525five period of Gastrodia elata41.010
SRR5643528five period of Gastrodia elata39.560
SRR5643658five period of Gastrodia elata37.180
SRR5643659five period of Gastrodia elata28.060
SRR5643660five period of Gastrodia elata28.090
SRR5643661five period of Gastrodia elata28.120
SRR5643662five period of Gastrodia elata26.530
SRR5643663five period of Gastrodia elata25.990
SRR5643664five period of Gastrodia elata27.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.410
SRR6049655Rhizomagastrodiae_C368-T10_good_118.890
SRR6049656Rhizomagastrodiae_C368-T07_good_111.890
SRR6049657Rhizomagastrodiae_C368-T07_good_115.610
SRR6049658Rhizomagastrodiae_C368-T04_good_117.400
SRR6049659Rhizomagastrodiae_C368-T04_good_115.750
SRR6049660Rhizomagastrodiae_C368-T01_good_113.920
SRR6049661Rhizomagastrodiae_C368-T04_good_111.510
SRR6049662Rhizomagastrodiae_C368-T01_good_114.430
SRR6049663Rhizomagastrodiae_C368-T01_good_117.870
SRR6049664Rhizomagastrodiae_C368-T10_good_112.610
SRR6049665Rhizomagastrodiae_C368-T10_good_112.610
SRP279888GastroGastrodia elata tuber 32.81
JuvenJuvenile tuber17.51
Mother_GastroMother tuber of Gastrodia elata 36.66
Mother_JuvenMother tuber of Juvenile 28.51