Detail information of GWHGAAEX007448/evm.TU.scaffold_2.294


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|94969145|ref|YP_591193.1|2.00E-74agmatinase [Candidatus Koribacter versatilis Ellin345]
KOGKOG29640Arginase family protein
nrgi|695026963|ref|XP_009400801.1|0PREDICTED: arginase 1, mitochondrial [Musa acuminata subsp. malaccensis]
Swissprottr|B8AU84|ARGI1_ORYSI0Arginase 1, mitochondrial (Precursor)
trEMBLtr|C5YBK6|C5YBK6_SORBI0Putative uncharacterized protein Sb06g000580 {ECO:0000313|EMBL:EES10350.1}
TAIRAT4G089000arginase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101199074112029281-
Transcript Sequence

Network for GWHGAAEX007448

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00491.20Arginase603313.00E-67
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01476E3.5.3.1, rocF, arg Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding
GO:0016813Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.480
SRR2545915Juvenile tuber23.350
SRP108465SRR5643513five period of Gastrodia elata25.500
SRR5643514five period of Gastrodia elata24.420
SRR5643515five period of Gastrodia elata25.330
SRR5643524five period of Gastrodia elata24.290
SRR5643525five period of Gastrodia elata26.330
SRR5643528five period of Gastrodia elata20.470
SRR5643658five period of Gastrodia elata25.710
SRR5643659five period of Gastrodia elata22.450
SRR5643660five period of Gastrodia elata22.010
SRR5643661five period of Gastrodia elata22.580
SRR5643662five period of Gastrodia elata24.110
SRR5643663five period of Gastrodia elata23.350
SRR5643664five period of Gastrodia elata25.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.830
SRR6049655Rhizomagastrodiae_C368-T10_good_122.250
SRR6049656Rhizomagastrodiae_C368-T07_good_117.150
SRR6049657Rhizomagastrodiae_C368-T07_good_127.290
SRR6049658Rhizomagastrodiae_C368-T04_good_122.430
SRR6049659Rhizomagastrodiae_C368-T04_good_123.580
SRR6049660Rhizomagastrodiae_C368-T01_good_120.340
SRR6049661Rhizomagastrodiae_C368-T04_good_120.540
SRR6049662Rhizomagastrodiae_C368-T01_good_115.680
SRR6049663Rhizomagastrodiae_C368-T01_good_116.950
SRR6049664Rhizomagastrodiae_C368-T10_good_116.810
SRR6049665Rhizomagastrodiae_C368-T10_good_116.810
SRP279888GastroGastrodia elata tuber 23.75
JuvenJuvenile tuber18.56
Mother_GastroMother tuber of Gastrodia elata 18.51
Mother_JuvenMother tuber of Juvenile 20.39