Detail information of GWHGAAEX007458/evm.TU.scaffold_2.309


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|297742476|emb|CBI34625.3|3.95E-74unnamed protein product [Vitis vinifera]
Swissprottr|Q8LMR9|Y3209_ORYSJ1.00E-70B3 domain-containing protein Os03g0120900
trEMBLtr|A0A068UVI6|A0A068UVI6_COFCA4.00E-74Coffea canephora
TAIRAT2G468703.00E-62AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101242263312423856+
Transcript Sequence

Network for GWHGAAEX007458

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B3431478.70E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.540
SRR2545915Juvenile tuber0.750
SRP108465SRR5643513five period of Gastrodia elata9.300
SRR5643514five period of Gastrodia elata11.400
SRR5643515five period of Gastrodia elata9.510
SRR5643524five period of Gastrodia elata10.120
SRR5643525five period of Gastrodia elata4.510
SRR5643528five period of Gastrodia elata1.270
SRR5643658five period of Gastrodia elata1.170
SRR5643659five period of Gastrodia elata1.030
SRR5643660five period of Gastrodia elata1.180
SRR5643661five period of Gastrodia elata2.150
SRR5643662five period of Gastrodia elata0.690
SRR5643663five period of Gastrodia elata0.670
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.400
SRR6049655Rhizomagastrodiae_C368-T10_good_114.400
SRR6049656Rhizomagastrodiae_C368-T07_good_15.720
SRR6049657Rhizomagastrodiae_C368-T07_good_13.880
SRR6049658Rhizomagastrodiae_C368-T04_good_14.210
SRR6049659Rhizomagastrodiae_C368-T04_good_13.220
SRR6049660Rhizomagastrodiae_C368-T01_good_18.790
SRR6049661Rhizomagastrodiae_C368-T04_good_14.070
SRR6049662Rhizomagastrodiae_C368-T01_good_116.820
SRR6049663Rhizomagastrodiae_C368-T01_good_114.980
SRR6049664Rhizomagastrodiae_C368-T10_good_16.690
SRR6049665Rhizomagastrodiae_C368-T10_good_16.690
SRP279888GastroGastrodia elata tuber 0.50
JuvenJuvenile tuber12.12
Mother_GastroMother tuber of Gastrodia elata 14.19
Mother_JuvenMother tuber of Juvenile 7.60