Detail information of GWHGAAEX007459/evm.TU.scaffold_2.312
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|697192618|ref|XP_009605400.1| | 5.51E-146 | PREDICTED: peroxidase 5 {ECO:0000250|UniProtKB:P22195}-like [Nicotiana tomentosiformis] |
| Swissprot | tr|A7QEU4|PER5_VITVI | 7.00E-137 | Peroxidase 5 {ECO:0000250|UniProtKB:P22195} (Precursor) |
| trEMBL | tr|V7ARS1|V7ARS1_PHAVU | 2.00E-141 | Uncharacterized protein {ECO:0000313|EMBL:ESW08352.1} |
| TAIR | AT3G21770 | 8.00E-98 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 12476259 | 12478152 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007459
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 47 | 294 | 4.20E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.140 |
| SRR2545915 | Juvenile tuber | 0.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.290 |
| SRR5643514 | five period of Gastrodia elata | 0.110 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.060 | |
| SRR5643525 | five period of Gastrodia elata | 2.340 | |
| SRR5643528 | five period of Gastrodia elata | 1.750 | |
| SRR5643658 | five period of Gastrodia elata | 13.820 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.130 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.180 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.140 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.110 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.120 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.520 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.070 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 1.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.03 |