Gene detail

Detail information of GWHGAAEX007462/evm.TU.scaffold_2.316

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|262194545\|ref\|YP_003265754.1\|	2.00E-21	cytochrome P450 [Haliangium ochraceum DSM 14365]
KOG	KOG0156	1.00E-115	Cytochrome P450 CYP2 subfamily
nr	gi\|195547007\|gb\|ACC59773.2\|	1.48E-142	flavonoid 3',5' hydroxylase-like protein [Vanda coerulea]
Swissprot	tr\|O64637\|C76C2_ARATH	3.00E-116	Cytochrome P450 76C2
trEMBL	tr\|B2LUN8\|B2LUN8_9ASPA	6.00E-143	Flavonoid 3',5' hydroxylase-like protein {ECO:0000313\|EMBL:ACC59773.2}
TAIR	AT3G61040	1.00E-115	cytochrome P450, family 76, subfamily C, polypeptide 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	12706181	12708014	-

Transcript Sequence
>GWHTAAEX007462 AATTGTTGCATTTCTCATCTTTTATACTGATTTGGTTTTGCCCACAAAAGCAAACATCGTTCCCCTAACAAGAAGAGAAAAGCATGGAAGAATTCACAATCCATTTTCTTCTATGGTCTGTCATCTGCGTTTCTCTATCGTTTTTTTTTTATGCAATCAACAAGTGCAGACGTTAACTCCACGATCACCGTCTTCCTCCGGGCCCCAAATCTCTCCCTATTTTTGGGAGCTTTTTCGAGCTGGGCCAAAATCCCCATCACTCCTTAGCCCGCCTCTCTCGAATCTACGGTCCAATCATGTTTTTGAGGCTTGGCAGTGTCAAAACCATAGTCATCTCCTCTCCCGCCATAGCCAAAGAAGTCCTTAAAACCAATGAACACTCCCTCTCCGGCCGCAGCCCACCCGACACCTTGAAAGGCTTCGGCCACCACAAAGTGTCGGTAGCATGGATTCCTCCGAATCAATCATGGCGGCATCTCCGTACTCTCTTGAAGAATCATCTCTTCAACGCGCACTCGCTCGGCACAACAGAATCGCTCCGACGGCGTAAAATTCAAGAACTCACACAATTTATCAGAGAGGAGCAAGGGAGGCCTATAGATATTGCTCGGGCGACTTTTTGTACTATGCTTAATCTTATTTCCATGACGATATTCTCTGTGGACGTCACGAATTTGAAATCTGATTCGTCTCAGGAATTAAAAGATTTGATATTGATTCTCGTGCAAGAACCTGGAAAACCTAACCTCTCCGATTTCTTTCCATTTCTAGCTCCTTTAGATTTGCAAGGCCGGAGACGGAGGTTTACGCAACACAGTAAAAAGCTGATCGACTTATTTAATCAAATGATTGAAAAGCGAATGGGTGAATCGGCATCAGTGGAAAAGGGCAGAACCGATATTGATTTGTTAGATGTGCTTCTTCAGCTCGTGCGAAAGGGTGACTCCGAACTTAGCAAACGAGTCATAATATCCTTACTTCTGGACTCTTTTGCCGCCGGTACAGAAACAAGTTCGACCACTGTGGAATGGGCTATGGCGGAATTACTTCGACGACCAGAGCTTATGGTGAGGGCTCGGGAGGAAATTGTGGCGGTTATCGGACTCGAGAGAGACGTGGAGGAATATGATATCCCGCGGCTTCCTTTTCTCCAAGCAGTGTTGAAGGAGACACTTCGACTTCATCCTCCGCTTCCGTTTTTGCTGCCTCACAAAGTAGAAGAGGACACGAAGATCAACGGCTACATGCTGTCAAAGAACAGCCAAGTGCTTGTCAACGTGTGGGCCATGGGTCGAGATGAGAATGTTTGGGAGAGTTCGGAACAGTTCATGCCGGAGAGGTTTATGGGCGAAGGAAAGAGTCAAATTGATTTTAAAGGTCAATACTTTGAACTCATACCATTTGGTTCGGACGGCGAATCTGTCCCGGAATGATATTGGGTGTACGGATGGTTCAACTCATGCTGGCCTCGCTCATTCAGTCCTTCGAATGGAAATTAGAGACAAAGGATTTGGATATGACCGAGAAATTCGGTCTTAACAGTTACCATGGCTACTCCTCTAAAGGTCTTTGCTACCCCCTCGGCTGCCTGATCCCCATTTTATCCGTAACACTCAATGGAAAAAATGTTATTATATTAAAATCAATAAAATAGAAATAAACTCAATTAAAAATGTGTTATTATATTCACGCTTTAAG

Network for GWHGAAEX007462

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	3	370	7.00E-79

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.190
	SRR5643514	five period of Gastrodia elata	0.070
	SRR5643515	five period of Gastrodia elata	0.130
	SRR5643524	five period of Gastrodia elata	0.080
	SRR5643525	five period of Gastrodia elata	0.460
	SRR5643528	five period of Gastrodia elata	0.340
	SRR5643658	five period of Gastrodia elata	0.400
	SRR5643659	five period of Gastrodia elata	0.270
	SRR5643660	five period of Gastrodia elata	0.340
	SRR5643661	five period of Gastrodia elata	0.130
	SRR5643662	five period of Gastrodia elata	1.010
	SRR5643663	five period of Gastrodia elata	0.680
	SRR5643664	five period of Gastrodia elata	0.550
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.080
SRP279888	Gastro	Gastrodia elata tuber	0.22
	Juven	Juvenile tuber	0.59
	Mother_Gastro	Mother tuber of Gastrodia elata	0.39
	Mother_Juven	Mother tuber of Juvenile	0.34