Gene detail

Detail information of GWHGAAEX007469/evm.TU.scaffold_2.322

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1021	2.00E-171	Acetylglucosaminyltransferase EXT1/exostosin 1
nr	gi\|672115226\|ref\|XP_008780056.1\|	0	PREDICTED: LOW QUALITY PROTEIN: xyloglucan galactosyltransferase KATAMARI1 homolog [Phoenix dactylifera]
Swissprot	tr\|Q8H038\|KATAM_ORYSJ	5.00E-103	Xyloglucan galactosyltransferase KATAMARI1 homolog
trEMBL	tr\|M0RNZ0\|M0RNZ0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P03100_001}
TAIR	AT5G62220	2.00E-171	glycosyltransferase 18

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	12922800	12925824	-

Transcript Sequence
>GWHTAAEX007469 GGGACTAAGTCACTGAGTCTAAATAACTCATTCATTATCCCATCATTATTAAAGTCTTTAAAATAAAATTCACTTATAATTATAAATTTAATATGAACATTTAATTACCTAAAAAAGAAATCAAAGTATTTTCTTTTCCCAAAATGAATTTGTGAATCTTTACCGACAGTTTTAACATCATCTGCATTTCCTTAGCCGCCGCAGCCGAAAATCTCTGGGTAGTAATTAGGGCACTTGGCACCGTCACTGCCGTCCTCTAAGTATCCGTGTCGTAATTCTGATCCTTAGATCTGATCACCGACGATACTCGGCACCTTACCATCACTCTCCAGAGCATAACCGACAGTCCCCCGCAGCATCTTCGCTTCCTCAATCCGCTCTGTGCGCCAGCTACCCTCGGATCTAGTCACCGCGATGGTTCCGCGGTCGGGTGCTCCGCCGGCGGAGACCTCCTTGCATAAAAAGCTGAGCTCCCTAAGTCCGTCGTCGGAGATCTCATTGCATTCGAGCAAGCAAAGGGCTTTCTCATATAGCCACAGCGCGCTCCTCATCCTCGGCGTCCTTTCCCTGCAGCTTCTTCTCATCCTCCTCTCTTCCCGCCATTTCTCTCCTGCTTCTCGCCTCACCTCTCACCGCCCCGTGGCGGCAGCCGCATCTTCGCAGTGCGACTCCGGCCTGATCTACATCTACGAGCTTCCCCCTAAGTTCAACAGAGATCTAATCGCCGATTGCTCGGGCATAAATCCCTGGGGAACCCGGTGTGGCGAGCTATCCAACGGTGGATTCGGGCTCCCGGCCGCCGATCTGGCCGGAATCGTCCCCTCCTCGCTCCTCACAGTCTGGTTCTCCACAGATCAGTTCATCGCCGAGCTCATCTTCCACCGGCGCATGCTTTCCCACCGCTGCCGGACCCTGAGCCCCTCGGCCGCATCGGTGTTCTACATCCCCTTCTACGCCGGGCTCGCCGTCGGAAAGCACCTCTGGTCCTCCGCCTCCACCTCCGCAGAGCGCGACCGCGCGTGCGCGGACCTGCTGTCATGGATCGCCGAGCAGCCGGCGTGGAGGGAATCCGGCGGCTGGGATCACTTCATTGCGCTGGGCCGCATCACGTGGGATTTCCGGCGGATGCGGGAAGGGGATTGGGGCGGGAGCTTCCTGTACATGCCGGGAATGGCGAATGTGACCCGGCTTCTGATCGAGCGGAACCCGTGGGACGAGCGCGAGGTGGGGATTCCGTACCCCACGGGATTCCACCCTCGGAGTGCCGGCGAGGTGCGGGCATGGCAGGAGTTCGTGCTGAGCCGCCCTCGGCGGACGCAGTTCAGTTTCGCCGGGGCTGCGCGGGCGGGTTTCAGGAACGATTTCAGGGGGCTCCTGCTCGGGGAGTGCGCGCGGGCGGGAGACGCCTGCAGGGCGGTGGATTGCCGCTGGCCTCGCTGCGGGAACAGCAGCGCGCAGACACTGCGCCTCTTTCTGGACTCCGTGTTCTGCCTGCAGCCCAGGGGTGACAGCTTCACGCGGCGGTCCTTGTTTGATTGCATGATCGCCGGAGCCATTCCGGTGATCTTCTGGAGGCGGAGCGCGTATGAGCAGTACATGTGGCACCTACCGGAGGAGTCGAAGGAGGCGGGGGAGTGGTCGGTGTTTATCGATCGGAGAGAGCTGACGAGCGGGGCGGTAAGCCTGAGAGGCGTTCTGGATGGGATGGGGGAGGAGAAGGTTCGGAGAATGAGGGAGAGGGTGGTCGAATTGATTCCAAGGCTCGTGTATGCGGATTCGGACCGAGGGCTGGGCGACGGGATGGACGACGCCTTCGACATGGCCGTCGCTGGGGTGCTCCGCCGCTTTCGGGGAAGGCGACGCCCGACGGTGTAATTTGTGGATTTTAGACAGGGGCAATTCGGTCACACCATTTTTTGTTTTTCTATTTATAAAATGTGTTATCGTATGTTTCGGCGCTGGAGGTGAATTTATTTACAATGGTAAACTTGAGATTACGGCCGTTTTGAATGCCGGTGGGGATTATTCATCATCAGTAGTTAAGGGTTCCCCTCTTTTATCTTAAAAAGGATCGAAGGTGAATTTTAATATAAATGATGCTAAATTGTGTGGCTTACATAATAAGGAGAACTTCTGACCTTAAGTAAAACTTGTTGAGATTTTATGGTGGATGTGTGCGTCTTAATGCTTAGTGGGGTTATGATCACATTCTTAAGATTTCTAATTGTTCTAAAACATAATTCTCAAGTCCCGAGGCACGGAGCCCCGGGTGTCTAGCAAGGCTTGCAGCCCAAGGAGGAGGCGTCCAGGCACGCCCGTGGAATAGAGGAGGGGGCTTTGCATGGGATTGACATGTTGGGGGCTTTGAATGGCGCATAAGAAAGCGGAGAAGGGGGCGGCAGCCCTAGGGCTGTGACTGAAGCCATAGGCCATGCCGCAACTATACCAGGAAGCCGTTGATGGGGAACTTTATCCGAGATTTGTATGGGAGGTCTACAGTGGCGTGCTGCAGCAAGTGACCACAAGGAGGCTGCATCGGTGTGCTACAGTGGTGGCCGCAGTGGGGTGCTGCGGCGGTGGCTGTGGTGAAGTGCTATGCGGTGCCTATGGCAGAGGGTTGAAGCGATAGCTCAGGAGCTGTGGTATTGACTGCAGTGAGCTGTTGTATGTTTAAGAGTTTAGAGAAACAAGGAAATGACATAGATAGAAGGATGCTAATGTGTGTGTGATTTCCTTAGCTGTGCAATCTTCCTCTTCTCCATGGGTTAGGGTTTCTCGGGAGAATGGTGCTAGTGTGTGTGAGTATATTCTTATGTTCGGATAATATTTATCTGTGATTGTTCTCAAATTTGTATTGTTTAGTTTAATGAGTTTGTTCAAGATTCCCTATAGAAAGAACTGTGATTATTTCCTAAGAATAGTTTCATGTAAACAATCAGCGCAGAGAAATAAAAGTTTAATGCCAATATATGCTTTCATGTAAACAATCAGCGCAGAGAAATAAAAGTTTAATGCCAATATATGC

Network for GWHGAAEX007469

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03016.14	Exostosin	84	422	2.00E-75

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.090
SRP064423	SRR2545915	Juvenile tuber	18.330
SRP108465	SRR5643513	five period of Gastrodia elata	31.500
	SRR5643514	five period of Gastrodia elata	29.320
	SRR5643515	five period of Gastrodia elata	35.460
	SRR5643524	five period of Gastrodia elata	31.240
	SRR5643525	five period of Gastrodia elata	32.840
	SRR5643528	five period of Gastrodia elata	31.290
	SRR5643658	five period of Gastrodia elata	37.340
	SRR5643659	five period of Gastrodia elata	78.630
	SRR5643660	five period of Gastrodia elata	82.390
	SRR5643661	five period of Gastrodia elata	85.820
	SRR5643662	five period of Gastrodia elata	84.560
	SRR5643663	five period of Gastrodia elata	107.160
	SRR5643664	five period of Gastrodia elata	101.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.350
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	24.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.210
SRP279888	Gastro	Gastrodia elata tuber	40.97
	Juven	Juvenile tuber	23.11
	Mother_Gastro	Mother tuber of Gastrodia elata	9.71
	Mother_Juven	Mother tuber of Juvenile	9.05