Detail information of GWHGAAEX007475/evm.TU.scaffold_2.330


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25053.00E-153Ankyrin repeat protein
nrgi|643717109|gb|KDP28735.1|0hypothetical protein JCGZ_14506 [Jatropha curcas]
trEMBLtr|A0A067K907|A0A067K907_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP28735.1}
TAIRAT1G019303.00E-153zinc finger protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101307287113116847+
Transcript Sequence

Network for GWHGAAEX007475

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.970
SRR2545915Juvenile tuber46.730
SRP108465SRR5643513five period of Gastrodia elata23.490
SRR5643514five period of Gastrodia elata19.350
SRR5643515five period of Gastrodia elata20.470
SRR5643524five period of Gastrodia elata19.670
SRR5643525five period of Gastrodia elata19.840
SRR5643528five period of Gastrodia elata16.450
SRR5643658five period of Gastrodia elata21.910
SRR5643659five period of Gastrodia elata30.940
SRR5643660five period of Gastrodia elata32.770
SRR5643661five period of Gastrodia elata28.080
SRR5643662five period of Gastrodia elata31.600
SRR5643663five period of Gastrodia elata32.550
SRR5643664five period of Gastrodia elata29.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.440
SRR6049655Rhizomagastrodiae_C368-T10_good_131.170
SRR6049656Rhizomagastrodiae_C368-T07_good_130.240
SRR6049657Rhizomagastrodiae_C368-T07_good_138.290
SRR6049658Rhizomagastrodiae_C368-T04_good_133.050
SRR6049659Rhizomagastrodiae_C368-T04_good_137.780
SRR6049660Rhizomagastrodiae_C368-T01_good_137.360
SRR6049661Rhizomagastrodiae_C368-T04_good_131.400
SRR6049662Rhizomagastrodiae_C368-T01_good_134.260
SRR6049663Rhizomagastrodiae_C368-T01_good_125.480
SRR6049664Rhizomagastrodiae_C368-T10_good_129.960
SRR6049665Rhizomagastrodiae_C368-T10_good_129.960
SRP279888GastroGastrodia elata tuber 29.62
JuvenJuvenile tuber34.47
Mother_GastroMother tuber of Gastrodia elata 15.08
Mother_JuvenMother tuber of Juvenile 20.39