Detail information of GWHGAAEX007476/evm.TU.scaffold_2.331


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|336176705|ref|YP_004582080.1|1.00E-701-aminocyclopropane-1-carboxylate deaminase [Frankia symbiont of Datisca glomerata]
KOGKOG025601-aminocyclopropane-1-carboxylate synthase, and related proteins
nrgi|695026817|ref|XP_009400722.1|0PREDICTED: probable aminotransferase ACS12 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8GYY0|1A112_ARATH0Probable aminotransferase ACS12
trEMBLtr|M0SYA2|M0SYA2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P13730_001}
TAIRAT5G5169001-amino-cyclopropane-1-carboxylate synthase 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101312312313137220+
Transcript Sequence

Network for GWHGAAEX007476

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_21425215.70E-80
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.460
SRR2545915Juvenile tuber10.310
SRP108465SRR5643513five period of Gastrodia elata15.080
SRR5643514five period of Gastrodia elata16.510
SRR5643515five period of Gastrodia elata13.200
SRR5643524five period of Gastrodia elata15.450
SRR5643525five period of Gastrodia elata8.840
SRR5643528five period of Gastrodia elata8.690
SRR5643658five period of Gastrodia elata5.500
SRR5643659five period of Gastrodia elata19.550
SRR5643660five period of Gastrodia elata17.030
SRR5643661five period of Gastrodia elata18.200
SRR5643662five period of Gastrodia elata21.360
SRR5643663five period of Gastrodia elata22.670
SRR5643664five period of Gastrodia elata21.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.180
SRR6049655Rhizomagastrodiae_C368-T10_good_119.410
SRR6049656Rhizomagastrodiae_C368-T07_good_130.440
SRR6049657Rhizomagastrodiae_C368-T07_good_119.310
SRR6049658Rhizomagastrodiae_C368-T04_good_118.120
SRR6049659Rhizomagastrodiae_C368-T04_good_114.500
SRR6049660Rhizomagastrodiae_C368-T01_good_117.810
SRR6049661Rhizomagastrodiae_C368-T04_good_127.420
SRR6049662Rhizomagastrodiae_C368-T01_good_121.560
SRR6049663Rhizomagastrodiae_C368-T01_good_118.210
SRR6049664Rhizomagastrodiae_C368-T10_good_118.430
SRR6049665Rhizomagastrodiae_C368-T10_good_118.430
SRP279888GastroGastrodia elata tuber 43.41
JuvenJuvenile tuber34.73
Mother_GastroMother tuber of Gastrodia elata 8.41
Mother_JuvenMother tuber of Juvenile 16.40