Detail information of GWHGAAEX007480/evm.TU.scaffold_2.336


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42701.00E-114GTPase-activator protein
nrgi|743777431|ref|XP_010919148.1|6.57E-138PREDICTED: rho GTPase-activating protein 5-like [Elaeis guineensis]
Swissprottr|Q8GYY5|RGAP3_ARATH5.00E-122Rho GTPase-activating protein 3
trEMBLtr|M0TPR6|M0TPR6_MUSAM2.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P12130_001}
TAIRAT5G224001.00E-114Rho GTPase activating protein with PAK-box/P21-Rho-binding domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101325704713273597+
Transcript Sequence

Network for GWHGAAEX007480

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00620.26RhoGAP1592934.30E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007165Biological Processsignal transduction

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.240
SRR2545915Juvenile tuber6.270
SRP108465SRR5643513five period of Gastrodia elata9.050
SRR5643514five period of Gastrodia elata8.830
SRR5643515five period of Gastrodia elata9.220
SRR5643524five period of Gastrodia elata8.540
SRR5643525five period of Gastrodia elata7.000
SRR5643528five period of Gastrodia elata8.230
SRR5643658five period of Gastrodia elata7.850
SRR5643659five period of Gastrodia elata8.540
SRR5643660five period of Gastrodia elata9.120
SRR5643661five period of Gastrodia elata8.970
SRR5643662five period of Gastrodia elata7.120
SRR5643663five period of Gastrodia elata7.960
SRR5643664five period of Gastrodia elata7.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.100
SRR6049655Rhizomagastrodiae_C368-T10_good_17.850
SRR6049656Rhizomagastrodiae_C368-T07_good_18.570
SRR6049657Rhizomagastrodiae_C368-T07_good_16.580
SRR6049658Rhizomagastrodiae_C368-T04_good_13.410
SRR6049659Rhizomagastrodiae_C368-T04_good_12.700
SRR6049660Rhizomagastrodiae_C368-T01_good_14.490
SRR6049661Rhizomagastrodiae_C368-T04_good_13.740
SRR6049662Rhizomagastrodiae_C368-T01_good_15.870
SRR6049663Rhizomagastrodiae_C368-T01_good_16.540
SRR6049664Rhizomagastrodiae_C368-T10_good_113.080
SRR6049665Rhizomagastrodiae_C368-T10_good_113.080
SRP279888GastroGastrodia elata tuber 4.26
JuvenJuvenile tuber5.29
Mother_GastroMother tuber of Gastrodia elata 9.16
Mother_JuvenMother tuber of Juvenile 8.42