Detail information of GWHGAAEX007482/evm.TU.scaffold_2.338
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116621240|ref|YP_823396.1| | 8.00E-35 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|743777416|ref|XP_010919140.1| | 0 | PREDICTED: CBL-interacting protein kinase 9-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q10SC8|CIPK9_ORYSJ | 0 | CBL-interacting protein kinase 9 |
| trEMBL | tr|W1PE91|W1PE91_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERN08247.1} |
| TAIR | AT1G01140 | 0 | CBL-interacting protein kinase 9 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 13296491 | 13334431 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007482
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 13 | 268 | 1.10E-74 |
| PF03822.13 | NAF | 307 | 367 | 9.70E-22 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.110 |
| SRR2545915 | Juvenile tuber | 36.860 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.750 |
| SRR5643514 | five period of Gastrodia elata | 26.000 | |
| SRR5643515 | five period of Gastrodia elata | 21.350 | |
| SRR5643524 | five period of Gastrodia elata | 27.430 | |
| SRR5643525 | five period of Gastrodia elata | 55.250 | |
| SRR5643528 | five period of Gastrodia elata | 87.580 | |
| SRR5643658 | five period of Gastrodia elata | 58.760 | |
| SRR5643659 | five period of Gastrodia elata | 20.480 | |
| SRR5643660 | five period of Gastrodia elata | 22.770 | |
| SRR5643661 | five period of Gastrodia elata | 19.900 | |
| SRR5643662 | five period of Gastrodia elata | 23.620 | |
| SRR5643663 | five period of Gastrodia elata | 20.840 | |
| SRR5643664 | five period of Gastrodia elata | 20.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.410 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.010 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 31.120 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 34.370 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 30.360 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 29.470 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.710 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.710 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 34.23 |
| Juven | Juvenile tuber | 19.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 72.36 | |
| Mother_Juven | Mother tuber of Juvenile | 69.84 |