Detail information of GWHGAAEX007483/evm.TU.scaffold_2.339


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743777950|ref|XP_010919418.1|1.27E-49PREDICTED: transcription repressor OFP13-like [Elaeis guineensis]
Swissprottr|Q9FMC8|OPF13_ARATH3.00E-19Transcription repressor OFP13
trEMBLtr|M0S778|M0S778_MUSAM4.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P11870_001}
TAIRAT5G048201.00E-18ovate family protein 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101333508113335704-
Transcript Sequence

Network for GWHGAAEX007483

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.12Ovate1241805.10E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.050
SRR2545915Juvenile tuber6.390
SRP108465SRR5643513five period of Gastrodia elata7.320
SRR5643514five period of Gastrodia elata14.750
SRR5643515five period of Gastrodia elata9.250
SRR5643524five period of Gastrodia elata11.540
SRR5643525five period of Gastrodia elata10.930
SRR5643528five period of Gastrodia elata14.350
SRR5643658five period of Gastrodia elata11.620
SRR5643659five period of Gastrodia elata1.840
SRR5643660five period of Gastrodia elata2.480
SRR5643661five period of Gastrodia elata2.510
SRR5643662five period of Gastrodia elata3.300
SRR5643663five period of Gastrodia elata0.950
SRR5643664five period of Gastrodia elata3.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.510
SRR6049655Rhizomagastrodiae_C368-T10_good_17.740
SRR6049656Rhizomagastrodiae_C368-T07_good_110.720
SRR6049657Rhizomagastrodiae_C368-T07_good_110.460
SRR6049658Rhizomagastrodiae_C368-T04_good_19.770
SRR6049659Rhizomagastrodiae_C368-T04_good_14.520
SRR6049660Rhizomagastrodiae_C368-T01_good_18.720
SRR6049661Rhizomagastrodiae_C368-T04_good_112.260
SRR6049662Rhizomagastrodiae_C368-T01_good_113.110
SRR6049663Rhizomagastrodiae_C368-T01_good_15.360
SRR6049664Rhizomagastrodiae_C368-T10_good_18.820
SRR6049665Rhizomagastrodiae_C368-T10_good_18.820
SRP279888GastroGastrodia elata tuber 3.02
JuvenJuvenile tuber13.83
Mother_GastroMother tuber of Gastrodia elata 14.85
Mother_JuvenMother tuber of Juvenile 9.92