Detail information of GWHGAAEX007497/evm.TU.scaffold_2.354


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|404496796|ref|YP_006720902.1|4.00E-163glutamine--phosphoribosylpyrophosphate amidotransferase [Geobacter metallireducens GS-15]
KOGKOG05720Glutamine phosphoribosylpyrophosphate amidotransferase
nrgi|672143448|ref|XP_008795602.1|0PREDICTED: amidophosphoribosyltransferase, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q9SI61|ASE1_ARATH0Amidophosphoribosyltransferase 1, chloroplastic (Precursor)
trEMBLtr|M0SPE7|M0SPE7_MUSAM0Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}
TAIRAT2G165700GLN phosphoribosyl pyrophosphate amidotransferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101372446313726516+
Transcript Sequence

Network for GWHGAAEX007497

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13537.5GATase_71632831.30E-22
PF00156.26Pribosyltran3614586.50E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00764purF, PPAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Purine metabolismmap00230
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0009116Biological Processnucleoside metabolic process
GO:0009113Biological Processpurine nucleobase biosynthetic process
GO:0004044Molecular Functionamidophosphoribosyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.500
SRR2545915Juvenile tuber4.270
SRP108465SRR5643513five period of Gastrodia elata8.750
SRR5643514five period of Gastrodia elata5.850
SRR5643515five period of Gastrodia elata6.770
SRR5643524five period of Gastrodia elata6.160
SRR5643525five period of Gastrodia elata5.020
SRR5643528five period of Gastrodia elata9.560
SRR5643658five period of Gastrodia elata3.740
SRR5643659five period of Gastrodia elata14.180
SRR5643660five period of Gastrodia elata14.300
SRR5643661five period of Gastrodia elata13.980
SRR5643662five period of Gastrodia elata17.390
SRR5643663five period of Gastrodia elata12.510
SRR5643664five period of Gastrodia elata10.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.070
SRR6049655Rhizomagastrodiae_C368-T10_good_115.050
SRR6049656Rhizomagastrodiae_C368-T07_good_111.740
SRR6049657Rhizomagastrodiae_C368-T07_good_110.570
SRR6049658Rhizomagastrodiae_C368-T04_good_110.520
SRR6049659Rhizomagastrodiae_C368-T04_good_19.830
SRR6049660Rhizomagastrodiae_C368-T01_good_112.870
SRR6049661Rhizomagastrodiae_C368-T04_good_18.580
SRR6049662Rhizomagastrodiae_C368-T01_good_112.650
SRR6049663Rhizomagastrodiae_C368-T01_good_113.220
SRR6049664Rhizomagastrodiae_C368-T10_good_110.360
SRR6049665Rhizomagastrodiae_C368-T10_good_110.360
SRP279888GastroGastrodia elata tuber 15.41
JuvenJuvenile tuber15.35
Mother_GastroMother tuber of Gastrodia elata 5.91
Mother_JuvenMother tuber of Juvenile 11.33