Detail information of GWHGAAEX007499/evm.TU.scaffold_2.357


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313203852|ref|YP_004042509.1|2.00E-22glyceraldehyde-3-phosphate dehydrogenase [Paludibacter propionicigenes WB4]
KOGKOG06574.00E-44Glyceraldehyde 3-phosphate dehydrogenase
nrgi|357528283|gb|AET80380.1|4.22E-46GAPDH4 [x Doritaenopsis hybrid cultivar]
Swissprottr|P26518|G3PC_MAGLI9.00E-46Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
trEMBLtr|G9FP73|G9FP73_9ASPA2.00E-46Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160} (Fragment)
TAIRAT1G134404.00E-44glyceraldehyde-3-phosphate dehydrogenase C2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101375255113754438-
Transcript Sequence

Network for GWHGAAEX007499

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00134GAPDH, gapA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.190
SRR2545915Juvenile tuber2.500
SRP108465SRR5643513five period of Gastrodia elata0.240
SRR5643514five period of Gastrodia elata0.400
SRR5643515five period of Gastrodia elata0.640
SRR5643524five period of Gastrodia elata0.490
SRR5643525five period of Gastrodia elata2.540
SRR5643528five period of Gastrodia elata2.900
SRR5643658five period of Gastrodia elata4.960
SRR5643659five period of Gastrodia elata1.840
SRR5643660five period of Gastrodia elata2.130
SRR5643661five period of Gastrodia elata2.340
SRR5643662five period of Gastrodia elata3.430
SRR5643663five period of Gastrodia elata2.790
SRR5643664five period of Gastrodia elata3.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.730
SRR6049655Rhizomagastrodiae_C368-T10_good_11.390
SRR6049656Rhizomagastrodiae_C368-T07_good_16.150
SRR6049657Rhizomagastrodiae_C368-T07_good_18.220
SRR6049658Rhizomagastrodiae_C368-T04_good_114.100
SRR6049659Rhizomagastrodiae_C368-T04_good_113.550
SRR6049660Rhizomagastrodiae_C368-T01_good_110.570
SRR6049661Rhizomagastrodiae_C368-T04_good_115.970
SRR6049662Rhizomagastrodiae_C368-T01_good_111.310
SRR6049663Rhizomagastrodiae_C368-T01_good_112.280
SRR6049664Rhizomagastrodiae_C368-T10_good_14.470
SRR6049665Rhizomagastrodiae_C368-T10_good_14.470
SRP279888GastroGastrodia elata tuber 6.33
JuvenJuvenile tuber0.25
Mother_GastroMother tuber of Gastrodia elata 30.43
Mother_JuvenMother tuber of Juvenile 2.34