Gene detail

Detail information of GWHGAAEX007503/evm.TU.scaffold_2.363

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428210381\|ref\|YP_007094734.1\|	2.00E-14	G-D-S-L family lipolytic protein [Chroococcidiopsis thermalis PCC 7203]
nr	gi\|743826650\|ref\|XP_010933356.1\|	2.36E-132	PREDICTED: GDSL esterase/lipase EXL3-like [Elaeis guineensis]
Swissprot	tr\|Q94CH6\|EXL3_ARATH	4.00E-102	GDSL esterase/lipase EXL3 (Precursor)
trEMBL	tr\|M0SS17\|M0SS17_MUSAM	1.00E-130	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P25560_001}
trEMBL	tr\|M0SS17\|M0SS17_MUSAM	7.00E-78	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P25560_001}
TAIR	AT1G75900	1.00E-101	GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	13850868	13878907	-

Transcript Sequence
>GWHTAAEX007503 ATGTGTCCCTTCCCTTTTAGTTCCTGCCAAATTGTTTACCAAGGCAATAAATTGTGCACAGATCCAACAAATTGTACAAAAGAAAATAAAAAAAAAGGAGCAGAGCAACAGGGAGACACAGAGAGCTTCCAACCAGTCAGAGAACACAAAGAAGCAATGGAGATGAGAGCGCTCGGAATTAATTTCCTGAGAGTTTCTTTATCCTTAGTATGCATGTTGTGCCTCCCCGCTGCTCGATCGACAGCTGAGGATTTAGCTGCCACCTCAGGCCCGATGAAACCTGCGGCTGTGATTTTGTTCGGAGACTCCATCGTTGATCCAGGAAACAATAACTACATAAATACCGTTATCAAGAGTAATTTCCCTCCTTATGGCAAGGATTTCATCGGCCATATTCCAACGGGCAGATTTTCAAATGGCAAGATTCCCGGTGACCTCATTGCATCAAGACTTGGAGTGAAAGAGTATGTGCCACCTTATCTCAGCCAAAATTTAGGGGACGAAGAACTGTTGACTGGTGTCAGCTTTGCTTCTGCAGCTTCAGGATACGATCCCATCACCCCGACTATTACGCTGGCGATATCGATGGGGGAGCAGCTGGAGCTTTTTGGGGAATATAAGGAGAGGATGGTGGGCGTAATCGGAAAAGCGCAGGCGGAAGATGTGGTGTCGCGGAGCCTTTTCCTCGTGTGCGCAGGCGCCAACGACATCGACAACACGTACTTCCTCAGCCCTTTTCGCCGCCCGCACTACGACCTACCTTCCTACCTCGAGCTCGTCGTCGCCCACGCCTCCGATTTTATCCAGAAATTGTATAAAATGGGAGCACGTAATATTGGAATTGTGGGGCTCGCTCCGTTGGGATGCATGCCTTCACAGATAAAACTTGCTGGAGGCAGCACCTATTTCAATAGTAATAATAATAATAAAAGGGAATGTGTGGAAGCACGCAATCAGGCAGCTCAGCTCTATAATTTCAAGATTAGTGCAGAGATCAAAAGCCTCGCAGCAGATTTCAGATACGCCAAACTCAACTATCTTGATATCTATTCCATGCTGATGGACATCATCCAGAGACCCACTGCTTACGGATTTGAAGTATCGGATAAAGGATGCTGTGGCACAGGAGAATTGGAGGTCTCAATACTGTGCAATATGTACTCACCAGTGTGCGCCAATGATACTAAATATGTGTTTTGGGATAGCTATCACCCTACAGAAAGAGCATACCAGCTTCTAAATCTGTTCATGGAGTACAAAGAGAAGATGAAGGCGATTGTAGGAGAAGAGAGGGCAGCATATATTATCCACAATTCTCTATATTTTATAGCCACAGGAACAGATGATCTAGCAAACACTTACTTCACAACACCATTTAGGAGGCTCCAGTTTGATCTCCCTTCCTACATAAACTTTACAGTTCACTCTGCTTCAACTTTTTTTCAGAAGTTATACCATTTAGGAGCACAAAAGATTGGTGTTGTGAGTGTTCCTCCCATTGGTTGCTTACCTTTCCAGAGGACTCTTGCAGGTGGAATTGATAGAATATGTGATCCAACCTACAACCAAGCTGCAAAGTCTTTCAACTCACTGCTATCAAAGGAAATAAATAGGCTAAATACCACTCTACCTAAATCAAGATTCCTTTATGTTGATATGTATAACCCTTTGCTTGATATCATTTTGCACCCTTCCAACTATGGATTTGTGGAATCAAAGAGAGGATGCTGCGGTACTGGAACTTTTGAGGTCACCCTAGCATGTAATAGCTTGACCACTTTTACATGTGAAGATGCATCCAAATATGTGTTCTGGGATAGCTACCATCCCACAGAGAGAGCTTACAGTATCTTAATAAGAAATCTTGTCCAAAGATATGGTTCATTTTTGAATTAA

Network for GWHGAAEX007503

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	97	413	3.40E-16
PF00657.21	Lipase_GDSL	440	619	1.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.170
SRP064423	SRR2545915	Juvenile tuber	3.980
SRP108465	SRR5643513	five period of Gastrodia elata	3.930
	SRR5643514	five period of Gastrodia elata	2.720
	SRR5643515	five period of Gastrodia elata	1.990
	SRR5643524	five period of Gastrodia elata	1.770
	SRR5643525	five period of Gastrodia elata	4.340
	SRR5643528	five period of Gastrodia elata	6.460
	SRR5643658	five period of Gastrodia elata	5.970
	SRR5643659	five period of Gastrodia elata	1.270
	SRR5643660	five period of Gastrodia elata	1.680
	SRR5643661	five period of Gastrodia elata	1.480
	SRR5643662	five period of Gastrodia elata	1.820
	SRR5643663	five period of Gastrodia elata	1.510
	SRR5643664	five period of Gastrodia elata	1.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.380
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.950
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.230
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.290
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.090
SRP279888	Gastro	Gastrodia elata tuber	1.79
	Juven	Juvenile tuber	0.71
	Mother_Gastro	Mother tuber of Gastrodia elata	2.76
	Mother_Juven	Mother tuber of Juvenile	1.28