Detail information of GWHGAAEX007504/evm.TU.scaffold_2.364
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|261855882|ref|YP_003263165.1| | 4.00E-41 | glutathione S-transferase domain-containing protein [Halothiobacillus neapolitanus c2] |
| KOG | KOG3029 | 2.00E-134 | Glutathione S-transferase-related protein |
| nr | gi|743779273|ref|XP_010920100.1| | 5.05E-163 | PREDICTED: prostaglandin E synthase 2 [Elaeis guineensis] |
| trEMBL | tr|M0SXM5|M0SXM5_MUSAM | 4.00E-152 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11460_001} |
| TAIR | AT5G42150 | 2.00E-134 | Glutathione S-transferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 13889182 | 13914831 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007504
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13417.5 | GST_N_3 | 104 | 169 | 6.00E-14 |
| PF00043.24 | GST_C | 254 | 318 | 0.00031 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05309 | PTGES2 | Metabolic pathways | map01100 |
| Arachidonic acid metabolism | map00590 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0050220 | Molecular Function | prostaglandin-E synthase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0015035 | Molecular Function | protein disulfide oxidoreductase activity |
| GO:0009055 | Molecular Function | electron carrier activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.440 |
| SRR2545915 | Juvenile tuber | 18.050 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.700 |
| SRR5643514 | five period of Gastrodia elata | 29.880 | |
| SRR5643515 | five period of Gastrodia elata | 23.710 | |
| SRR5643524 | five period of Gastrodia elata | 26.470 | |
| SRR5643525 | five period of Gastrodia elata | 17.080 | |
| SRR5643528 | five period of Gastrodia elata | 24.120 | |
| SRR5643658 | five period of Gastrodia elata | 14.310 | |
| SRR5643659 | five period of Gastrodia elata | 19.590 | |
| SRR5643660 | five period of Gastrodia elata | 22.250 | |
| SRR5643661 | five period of Gastrodia elata | 18.310 | |
| SRR5643662 | five period of Gastrodia elata | 20.610 | |
| SRR5643663 | five period of Gastrodia elata | 23.480 | |
| SRR5643664 | five period of Gastrodia elata | 18.010 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.430 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.990 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.110 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.650 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.630 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.360 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.170 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 34.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 49.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 49.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.06 |
| Juven | Juvenile tuber | 21.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.51 | |
| Mother_Juven | Mother tuber of Juvenile | 25.29 |