Detail information of GWHGAAEX007511/evm.TU.scaffold_2.372


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11340Uncharacterized conserved protein
nrgi|672136485|ref|XP_008791942.1|0PREDICTED: CSC1-like protein At4g35870 [Phoenix dactylifera]
Swissprottr|Q9SZT4|CSCLE_ARATH0CSC1-like protein At4g35870
trEMBLtr|M0SXK0|M0SXK0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11210_001}
TAIRAT4G358700early-responsive to dehydration stress protein (ERD4)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101409254014094996-
Transcript Sequence

Network for GWHGAAEX007511

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13967.5RSN1_TM711691.90E-08
PF14703.5PHM7_cyt2034012.20E-09
PF02714.14RSN1_7TM4135981.20E-13
PF02714.14RSN1_7TM6647512.80E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.730
SRR2545915Juvenile tuber11.920
SRP108465SRR5643513five period of Gastrodia elata13.280
SRR5643514five period of Gastrodia elata12.830
SRR5643515five period of Gastrodia elata14.670
SRR5643524five period of Gastrodia elata12.970
SRR5643525five period of Gastrodia elata21.730
SRR5643528five period of Gastrodia elata19.770
SRR5643658five period of Gastrodia elata27.670
SRR5643659five period of Gastrodia elata15.100
SRR5643660five period of Gastrodia elata14.900
SRR5643661five period of Gastrodia elata15.480
SRR5643662five period of Gastrodia elata15.830
SRR5643663five period of Gastrodia elata14.700
SRR5643664five period of Gastrodia elata15.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.970
SRR6049655Rhizomagastrodiae_C368-T10_good_123.340
SRR6049656Rhizomagastrodiae_C368-T07_good_118.050
SRR6049657Rhizomagastrodiae_C368-T07_good_116.910
SRR6049658Rhizomagastrodiae_C368-T04_good_115.530
SRR6049659Rhizomagastrodiae_C368-T04_good_116.930
SRR6049660Rhizomagastrodiae_C368-T01_good_120.200
SRR6049661Rhizomagastrodiae_C368-T04_good_118.060
SRR6049662Rhizomagastrodiae_C368-T01_good_118.760
SRR6049663Rhizomagastrodiae_C368-T01_good_117.460
SRR6049664Rhizomagastrodiae_C368-T10_good_118.240
SRR6049665Rhizomagastrodiae_C368-T10_good_118.240
SRP279888GastroGastrodia elata tuber 9.54
JuvenJuvenile tuber15.39
Mother_GastroMother tuber of Gastrodia elata 17.57
Mother_JuvenMother tuber of Juvenile 22.11