Detail information of GWHGAAEX007520/evm.TU.scaffold_2.388


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30008.00E-117Microtubule-binding protein involved in cell cycle control
nrgi|695020999|ref|XP_009397574.1|5.22E-139PREDICTED: microtubule-associated protein RP/EB family member 1C-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FGQ6|EB1C_ARATH2.00E-117Microtubule-associated protein RP/EB family member 1C
trEMBLtr|M0STB0|M0STB0_MUSAM2.00E-139Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P29980_001}
TAIRAT5G672708.00E-117end binding protein 1C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101440555814408822+
Transcript Sequence

Network for GWHGAAEX007520

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00307.30CH171102.80E-10
PF03271.16EB12122501.10E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008017Molecular Functionmicrotubule binding
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.060
SRR2545915Juvenile tuber21.050
SRP108465SRR5643513five period of Gastrodia elata26.000
SRR5643514five period of Gastrodia elata22.220
SRR5643515five period of Gastrodia elata22.350
SRR5643524five period of Gastrodia elata24.770
SRR5643525five period of Gastrodia elata16.530
SRR5643528five period of Gastrodia elata20.570
SRR5643658five period of Gastrodia elata16.190
SRR5643659five period of Gastrodia elata24.250
SRR5643660five period of Gastrodia elata25.020
SRR5643661five period of Gastrodia elata24.520
SRR5643662five period of Gastrodia elata22.890
SRR5643663five period of Gastrodia elata25.100
SRR5643664five period of Gastrodia elata22.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.090
SRR6049655Rhizomagastrodiae_C368-T10_good_131.970
SRR6049656Rhizomagastrodiae_C368-T07_good_133.870
SRR6049657Rhizomagastrodiae_C368-T07_good_129.400
SRR6049658Rhizomagastrodiae_C368-T04_good_125.550
SRR6049659Rhizomagastrodiae_C368-T04_good_124.650
SRR6049660Rhizomagastrodiae_C368-T01_good_134.310
SRR6049661Rhizomagastrodiae_C368-T04_good_128.930
SRR6049662Rhizomagastrodiae_C368-T01_good_152.770
SRR6049663Rhizomagastrodiae_C368-T01_good_141.450
SRR6049664Rhizomagastrodiae_C368-T10_good_140.590
SRR6049665Rhizomagastrodiae_C368-T10_good_140.590
SRP279888GastroGastrodia elata tuber 32.32
JuvenJuvenile tuber21.78
Mother_GastroMother tuber of Gastrodia elata 21.67
Mother_JuvenMother tuber of Juvenile 17.78