Detail information of GWHGAAEX007521/evm.TU.scaffold_2.389


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|190573515|ref|YP_001971360.1|2.00E-07asparagine synthetase B [Stenotrophomonas maltophilia K279a]
nrgi|452714|emb|CAA54526.1|5.28E-112unknown [Asparagus officinalis]
Swissprottr|P24805|TSJT1_TOBAC1.00E-24Stem-specific protein TSJT1
trEMBLtr|Q43378|Q43378_ASPOF2.00E-112Putative uncharacterized protein {ECO:0000313|EMBL:CAA54526.1}
TAIRAT3G154503.00E-102Aluminium induced protein with YGL and LRDR motifs

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101440913914410134-
Transcript Sequence

Network for GWHGAAEX007521

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12481.7DUF370022451.60E-88
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms73.160
SRR2545915Juvenile tuber40.390
SRP108465SRR5643513five period of Gastrodia elata129.360
SRR5643514five period of Gastrodia elata149.390
SRR5643515five period of Gastrodia elata147.180
SRR5643524five period of Gastrodia elata132.950
SRR5643525five period of Gastrodia elata249.610
SRR5643528five period of Gastrodia elata143.740
SRR5643658five period of Gastrodia elata495.660
SRR5643659five period of Gastrodia elata32.890
SRR5643660five period of Gastrodia elata32.200
SRR5643661five period of Gastrodia elata22.830
SRR5643662five period of Gastrodia elata25.800
SRR5643663five period of Gastrodia elata15.250
SRR5643664five period of Gastrodia elata37.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_188.940
SRR6049655Rhizomagastrodiae_C368-T10_good_124.800
SRR6049656Rhizomagastrodiae_C368-T07_good_160.190
SRR6049657Rhizomagastrodiae_C368-T07_good_1154.970
SRR6049658Rhizomagastrodiae_C368-T04_good_1114.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1127.410
SRR6049660Rhizomagastrodiae_C368-T01_good_168.410
SRR6049661Rhizomagastrodiae_C368-T04_good_195.050
SRR6049662Rhizomagastrodiae_C368-T01_good_129.030
SRR6049663Rhizomagastrodiae_C368-T01_good_121.700
SRR6049664Rhizomagastrodiae_C368-T10_good_125.570
SRR6049665Rhizomagastrodiae_C368-T10_good_125.570
SRP279888GastroGastrodia elata tuber 32.56
JuvenJuvenile tuber72.45
Mother_GastroMother tuber of Gastrodia elata 709.08
Mother_JuvenMother tuber of Juvenile 185.90