Detail information of GWHGAAEX007522/evm.TU.scaffold_2.390


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743868313|ref|XP_010905537.1|4.60E-153PREDICTED: CBS domain-containing protein CBSX5-like [Elaeis guineensis]
Swissprottr|Q84WQ5|CBSX5_ARATH1.00E-70CBS domain-containing protein CBSX5
trEMBLtr|M0U5R7|M0U5R7_MUSAM3.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP02550_001}
TAIRAT5G537503.00E-71CBS domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101443228614434074+
Transcript Sequence

Network for GWHGAAEX007522

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS3233708.90E-07
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.580
SRR2545915Juvenile tuber60.620
SRP108465SRR5643513five period of Gastrodia elata77.280
SRR5643514five period of Gastrodia elata122.470
SRR5643515five period of Gastrodia elata181.130
SRR5643524five period of Gastrodia elata191.580
SRR5643525five period of Gastrodia elata66.480
SRR5643528five period of Gastrodia elata112.110
SRR5643658five period of Gastrodia elata84.840
SRR5643659five period of Gastrodia elata155.750
SRR5643660five period of Gastrodia elata132.080
SRR5643661five period of Gastrodia elata174.540
SRR5643662five period of Gastrodia elata90.340
SRR5643663five period of Gastrodia elata81.940
SRR5643664five period of Gastrodia elata35.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.510
SRR6049655Rhizomagastrodiae_C368-T10_good_149.170
SRR6049656Rhizomagastrodiae_C368-T07_good_136.940
SRR6049657Rhizomagastrodiae_C368-T07_good_125.560
SRR6049658Rhizomagastrodiae_C368-T04_good_122.620
SRR6049659Rhizomagastrodiae_C368-T04_good_122.380
SRR6049660Rhizomagastrodiae_C368-T01_good_136.760
SRR6049661Rhizomagastrodiae_C368-T04_good_121.180
SRR6049662Rhizomagastrodiae_C368-T01_good_155.490
SRR6049663Rhizomagastrodiae_C368-T01_good_143.780
SRR6049664Rhizomagastrodiae_C368-T10_good_176.280
SRR6049665Rhizomagastrodiae_C368-T10_good_176.280
SRP279888GastroGastrodia elata tuber 17.61
JuvenJuvenile tuber25.45
Mother_GastroMother tuber of Gastrodia elata 407.72
Mother_JuvenMother tuber of Juvenile 207.59