Detail information of GWHGAAEX007530/evm.TU.scaffold_2.400


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743826646|ref|XP_010933355.1|4.30E-83PREDICTED: F-box protein At4g35930-like [Elaeis guineensis]
Swissprottr|Q5XF11|FB248_ARATH6.00E-56F-box protein At4g35930
trEMBLtr|M0TQ10|M0TQ10_MUSAM1.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P13070_001}
TAIRAT4G359301.00E-33F-box family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101465723314658234-
Transcript Sequence

Network for GWHGAAEX007530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.920
SRR2545915Juvenile tuber24.760
SRP108465SRR5643513five period of Gastrodia elata12.580
SRR5643514five period of Gastrodia elata11.770
SRR5643515five period of Gastrodia elata8.720
SRR5643524five period of Gastrodia elata9.390
SRR5643525five period of Gastrodia elata14.570
SRR5643528five period of Gastrodia elata13.660
SRR5643658five period of Gastrodia elata19.410
SRR5643659five period of Gastrodia elata12.210
SRR5643660five period of Gastrodia elata18.740
SRR5643661five period of Gastrodia elata17.280
SRR5643662five period of Gastrodia elata18.750
SRR5643663five period of Gastrodia elata19.310
SRR5643664five period of Gastrodia elata31.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.880
SRR6049655Rhizomagastrodiae_C368-T10_good_139.220
SRR6049656Rhizomagastrodiae_C368-T07_good_127.250
SRR6049657Rhizomagastrodiae_C368-T07_good_130.050
SRR6049658Rhizomagastrodiae_C368-T04_good_130.370
SRR6049659Rhizomagastrodiae_C368-T04_good_134.560
SRR6049660Rhizomagastrodiae_C368-T01_good_124.890
SRR6049661Rhizomagastrodiae_C368-T04_good_132.040
SRR6049662Rhizomagastrodiae_C368-T01_good_118.000
SRR6049663Rhizomagastrodiae_C368-T01_good_118.990
SRR6049664Rhizomagastrodiae_C368-T10_good_122.080
SRR6049665Rhizomagastrodiae_C368-T10_good_122.080
SRP279888GastroGastrodia elata tuber 85.43
JuvenJuvenile tuber21.12
Mother_GastroMother tuber of Gastrodia elata 16.97
Mother_JuvenMother tuber of Juvenile 17.74