Detail information of GWHGAAEX007546/evm.TU.scaffold_2.422


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|14520823|ref|NP_126298.1|4.00E-63proteasome subunit alpha [Pyrococcus abyssi GE5]
KOGKOG01836.00E-15420S proteasome, regulatory subunit alpha type PSMA7/PRE6
nrgi|695003030|ref|XP_009383343.1|3.57E-160PREDICTED: proteasome subunit alpha type-7 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SXU1|PSA7_CICAR1.00E-158Proteasome subunit alpha type-7
trEMBLtr|M0S4T8|M0S4T8_MUSAM1.00E-160Proteasome subunit alpha type {ECO:0000256|RuleBase:RU000551}
TAIRAT5G661406.00E-154proteasome alpha subunit D2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101518661315207743-
Transcript Sequence

Network for GWHGAAEX007546

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10584.8Proteasome_A_N4267.80E-14
PF00227.25Proteasome272101.40E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02731PSMA7 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0006511Biological Processubiquitin-dependent protein catabolic process
GO:0051603Biological Processproteolysis involved in cellular protein catabolic process
GO:0004175Molecular Functionendopeptidase activity
GO:0004298Molecular Functionthreonine-type endopeptidase activity
GO:0019773Cellular Componentproteasome core complex, alpha-subunit complex
GO:0005839Cellular Componentproteasome core complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms99.780
SRR2545915Juvenile tuber93.100
SRP108465SRR5643513five period of Gastrodia elata140.030
SRR5643514five period of Gastrodia elata161.260
SRR5643515five period of Gastrodia elata139.000
SRR5643524five period of Gastrodia elata161.990
SRR5643525five period of Gastrodia elata92.590
SRR5643528five period of Gastrodia elata115.980
SRR5643658five period of Gastrodia elata90.320
SRR5643659five period of Gastrodia elata105.940
SRR5643660five period of Gastrodia elata109.100
SRR5643661five period of Gastrodia elata127.540
SRR5643662five period of Gastrodia elata94.170
SRR5643663five period of Gastrodia elata100.180
SRR5643664five period of Gastrodia elata95.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1148.640
SRR6049655Rhizomagastrodiae_C368-T10_good_1190.650
SRR6049656Rhizomagastrodiae_C368-T07_good_1182.500
SRR6049657Rhizomagastrodiae_C368-T07_good_1143.610
SRR6049658Rhizomagastrodiae_C368-T04_good_1151.650
SRR6049659Rhizomagastrodiae_C368-T04_good_1146.120
SRR6049660Rhizomagastrodiae_C368-T01_good_1157.480
SRR6049661Rhizomagastrodiae_C368-T04_good_1164.940
SRR6049662Rhizomagastrodiae_C368-T01_good_1237.360
SRR6049663Rhizomagastrodiae_C368-T01_good_1200.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1242.960
SRR6049665Rhizomagastrodiae_C368-T10_good_1242.960
SRP279888GastroGastrodia elata tuber 108.67
JuvenJuvenile tuber155.62
Mother_GastroMother tuber of Gastrodia elata 109.66
Mother_JuvenMother tuber of Juvenile 83.72