Detail information of GWHGAAEX007552/evm.TU.scaffold_2.428


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262193487|ref|YP_003264696.1|1.00E-36MATE efflux family protein [Haliangium ochraceum DSM 14365]
KOGKOG13472.00E-167Uncharacterized membrane protein, predicted efflux pump
nrgi|743828531|ref|XP_010933890.1|0PREDICTED: MATE efflux family protein 5-like [Elaeis guineensis]
Swissprottr|Q9SIA4|MATE5_ARATH1.00E-56MATE efflux family protein 5
trEMBLtr|A0A061G622|A0A061G622_THECC0MATE efflux family protein {ECO:0000256|RuleBase:RU004914}
TAIRAT5G520502.00E-167MATE efflux family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101534490515346769-
Transcript Sequence

Network for GWHGAAEX007552

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01554.17MatE492072.50E-29
PF01554.17MatE2724341.60E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015297Molecular Functionantiporter activity
GO:0042910Molecular Functionxenobiotic transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.250
SRR2545915Juvenile tuber3.540
SRP108465SRR5643513five period of Gastrodia elata29.500
SRR5643514five period of Gastrodia elata12.660
SRR5643515five period of Gastrodia elata20.230
SRR5643524five period of Gastrodia elata15.750
SRR5643525five period of Gastrodia elata10.200
SRR5643528five period of Gastrodia elata25.320
SRR5643658five period of Gastrodia elata11.460
SRR5643659five period of Gastrodia elata10.990
SRR5643660five period of Gastrodia elata7.630
SRR5643661five period of Gastrodia elata8.010
SRR5643662five period of Gastrodia elata4.320
SRR5643663five period of Gastrodia elata4.070
SRR5643664five period of Gastrodia elata3.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.070
SRR6049655Rhizomagastrodiae_C368-T10_good_127.470
SRR6049656Rhizomagastrodiae_C368-T07_good_121.520
SRR6049657Rhizomagastrodiae_C368-T07_good_120.630
SRR6049658Rhizomagastrodiae_C368-T04_good_127.220
SRR6049659Rhizomagastrodiae_C368-T04_good_121.040
SRR6049660Rhizomagastrodiae_C368-T01_good_111.100
SRR6049661Rhizomagastrodiae_C368-T04_good_122.050
SRR6049662Rhizomagastrodiae_C368-T01_good_119.330
SRR6049663Rhizomagastrodiae_C368-T01_good_115.440
SRR6049664Rhizomagastrodiae_C368-T10_good_136.020
SRR6049665Rhizomagastrodiae_C368-T10_good_136.020
SRP279888GastroGastrodia elata tuber 2.00
JuvenJuvenile tuber23.06
Mother_GastroMother tuber of Gastrodia elata 71.13
Mother_JuvenMother tuber of Juvenile 120.24