Detail information of GWHGAAEX007554/evm.TU.scaffold_2.431
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15605784|ref|NP_213161.1| | 1.00E-173 | GMP synthase [Aquifex aeolicus VF5] |
| KOG | KOG1622 | 0 | GMP synthase |
| nr | gi|695011122|ref|XP_009392265.1| | 0 | PREDICTED: GMP synthase [glutamine-hydrolyzing] [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|P48261|TRPG_CYAPA | 6.00E-09 | Anthranilate synthase component 2 |
| trEMBL | tr|A3BRY1|A3BRY1_ORYSJ | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:EAZ42320.1} |
| TAIR | AT1G63660 | 0 | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 15445781 | 15451098 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007554
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00117.27 | GATase | 20 | 206 | 1.80E-32 |
| PF02540.16 | NAD_synthase | 234 | 261 | 1.10E-05 |
| PF00958.21 | GMP_synt_C | 450 | 502 | 2.00E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01951 | guaA, GMPS | Metabolic pathways | map01100 |
| Purine metabolism | map00230 | ||
| Drug metabolism - other enzymes | map00983 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006164 | Biological Process | purine nucleotide biosynthetic process |
| GO:0006177 | Biological Process | GMP biosynthetic process |
| GO:0003922 | Molecular Function | GMP synthase (glutamine-hydrolyzing) activity |
| GO:0016462 | Molecular Function | pyrophosphatase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.980 |
| SRR2545915 | Juvenile tuber | 4.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.540 |
| SRR5643514 | five period of Gastrodia elata | 5.020 | |
| SRR5643515 | five period of Gastrodia elata | 4.200 | |
| SRR5643524 | five period of Gastrodia elata | 4.360 | |
| SRR5643525 | five period of Gastrodia elata | 0.660 | |
| SRR5643528 | five period of Gastrodia elata | 0.690 | |
| SRR5643658 | five period of Gastrodia elata | 0.220 | |
| SRR5643659 | five period of Gastrodia elata | 7.140 | |
| SRR5643660 | five period of Gastrodia elata | 9.010 | |
| SRR5643661 | five period of Gastrodia elata | 7.270 | |
| SRR5643662 | five period of Gastrodia elata | 7.800 | |
| SRR5643663 | five period of Gastrodia elata | 6.230 | |
| SRR5643664 | five period of Gastrodia elata | 7.460 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.510 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.880 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.690 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.650 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.730 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.730 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.94 |
| Juven | Juvenile tuber | 11.54 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.27 | |
| Mother_Juven | Mother tuber of Juvenile | 4.01 |