Detail information of GWHGAAEX007556/evm.TU.scaffold_20.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00371.00E-84Ca2+-binding protein, EF-Hand protein superfamily
nrgi|657402648|gb|KEH41523.1|2.15E-123calcium-binding EF-hand protein [Medicago truncatula]
Swissprottr|Q8W4L0|CML49_ARATH1.00E-112Probable calcium-binding protein CML49
trEMBLtr|A0A072VJB4|A0A072VJB4_MEDTR8.00E-124Calcium-binding EF-hand protein {ECO:0000313|EMBL:KEH41523.1}
TAIRAT3G103001.00E-84Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000026265653306858-
Transcript Sequence

Network for GWHGAAEX007556

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13202.5EF-hand_51301510.00026
PF13405.5EF-hand_61952232.00E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.270
SRR2545915Juvenile tuber16.020
SRP108465SRR5643513five period of Gastrodia elata20.840
SRR5643514five period of Gastrodia elata21.650
SRR5643515five period of Gastrodia elata18.810
SRR5643524five period of Gastrodia elata21.180
SRR5643525five period of Gastrodia elata35.820
SRR5643528five period of Gastrodia elata28.030
SRR5643658five period of Gastrodia elata38.860
SRR5643659five period of Gastrodia elata25.090
SRR5643660five period of Gastrodia elata24.570
SRR5643661five period of Gastrodia elata24.630
SRR5643662five period of Gastrodia elata24.830
SRR5643663five period of Gastrodia elata24.300
SRR5643664five period of Gastrodia elata23.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.450
SRR6049655Rhizomagastrodiae_C368-T10_good_116.180
SRR6049656Rhizomagastrodiae_C368-T07_good_118.430
SRR6049657Rhizomagastrodiae_C368-T07_good_120.210
SRR6049658Rhizomagastrodiae_C368-T04_good_115.480
SRR6049659Rhizomagastrodiae_C368-T04_good_112.870
SRR6049660Rhizomagastrodiae_C368-T01_good_116.250
SRR6049661Rhizomagastrodiae_C368-T04_good_112.870
SRR6049662Rhizomagastrodiae_C368-T01_good_114.980
SRR6049663Rhizomagastrodiae_C368-T01_good_115.200
SRR6049664Rhizomagastrodiae_C368-T10_good_126.370
SRR6049665Rhizomagastrodiae_C368-T10_good_126.370
SRP279888GastroGastrodia elata tuber 29.10
JuvenJuvenile tuber39.15
Mother_GastroMother tuber of Gastrodia elata 18.41
Mother_JuvenMother tuber of Juvenile 29.88