Detail information of GWHGAAEX007562/evm.TU.scaffold_20.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2762 | 2.00E-174 | Mannosyltransferase |
| nr | gi|672153226|ref|XP_008797559.1| | 0 | PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Phoenix dactylifera] |
| Swissprot | tr|O82244|ALG3_ARATH | 7.00E-175 | Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase |
| trEMBL | tr|M0RYH3|M0RYH3_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P09640_001} |
| TAIR | AT2G47760 | 2.00E-174 | asparagine-linked glycosylation 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000026 | 715172 | 755604 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007562
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05208.12 | ALG3 | 26 | 391 | 1.50E-134 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT58 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03845 | ALG3 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0000030 | Molecular Function | mannosyltransferase activity |
| GO:0030176 | Cellular Component | integral component of endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.840 |
| SRR2545915 | Juvenile tuber | 8.680 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.760 |
| SRR5643514 | five period of Gastrodia elata | 10.500 | |
| SRR5643515 | five period of Gastrodia elata | 8.790 | |
| SRR5643524 | five period of Gastrodia elata | 9.950 | |
| SRR5643525 | five period of Gastrodia elata | 10.950 | |
| SRR5643528 | five period of Gastrodia elata | 11.270 | |
| SRR5643658 | five period of Gastrodia elata | 10.170 | |
| SRR5643659 | five period of Gastrodia elata | 5.730 | |
| SRR5643660 | five period of Gastrodia elata | 4.180 | |
| SRR5643661 | five period of Gastrodia elata | 3.810 | |
| SRR5643662 | five period of Gastrodia elata | 3.830 | |
| SRR5643663 | five period of Gastrodia elata | 4.710 | |
| SRR5643664 | five period of Gastrodia elata | 3.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.700 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.920 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.440 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.040 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.650 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.650 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.15 |
| Juven | Juvenile tuber | 6.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.21 | |
| Mother_Juven | Mother tuber of Juvenile | 10.43 |