Detail information of GWHGAAEX007567/evm.TU.scaffold_20.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|302878409|ref|YP_003846973.1| | 2.00E-25 | serine/threonine protein kinase [Gallionella capsiferriformans ES-2] |
| KOG | KOG0663 | 0 | Protein kinase PITSLRE and related kinases |
| nr | gi|743765248|ref|XP_010912840.1| | 0 | PREDICTED: cyclin-dependent kinase G-2-like [Elaeis guineensis] |
| Swissprot | tr|Q7XUF4|CDKG2_ORYSJ | 0 | Cyclin-dependent kinase G-2 |
| trEMBL | tr|F6HG49|F6HG49_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB51242.1} |
| TAIR | AT1G67580 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000026 | 1394799 | 1402492 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007567
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 326 | 619 | 7.80E-73 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CDK-PITSLRE |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.040 |
| SRR2545915 | Juvenile tuber | 22.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 18.600 |
| SRR5643514 | five period of Gastrodia elata | 23.110 | |
| SRR5643515 | five period of Gastrodia elata | 21.120 | |
| SRR5643524 | five period of Gastrodia elata | 23.020 | |
| SRR5643525 | five period of Gastrodia elata | 33.610 | |
| SRR5643528 | five period of Gastrodia elata | 20.160 | |
| SRR5643658 | five period of Gastrodia elata | 31.370 | |
| SRR5643659 | five period of Gastrodia elata | 28.250 | |
| SRR5643660 | five period of Gastrodia elata | 33.370 | |
| SRR5643661 | five period of Gastrodia elata | 24.990 | |
| SRR5643662 | five period of Gastrodia elata | 18.510 | |
| SRR5643663 | five period of Gastrodia elata | 27.340 | |
| SRR5643664 | five period of Gastrodia elata | 19.540 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 35.410 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 25.920 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 36.310 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 43.370 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 49.240 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 51.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 39.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 45.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 33.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.430 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.430 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 50.86 |
| Juven | Juvenile tuber | 52.55 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.96 | |
| Mother_Juven | Mother tuber of Juvenile | 60.90 |