Gene detail

Detail information of GWHGAAEX007572/CADD00608.2.gene

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|658031223\|ref\|XP_008351072.1\|	9.05E-06	PREDICTED: uncharacterized protein LOC103414473 [Malus domestica]
trEMBL	tr\|M0SVQ2\|M0SVQ2_MUSAM	7.00E-10	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P04730_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000026	1843170	1860975	-

Transcript Sequence
>GWHTAAEX007572 GCAACATTCATTTCCATTATTTATATATTTTATACCGGCTTCACCTGCTAACCGTAAGTTCTGCCCTAGCCGACGCACGCTCCGTCAAAAGGCTTGCCTTCACGTTCCTCTTCCATTCGCAAGCGTTATGGACTCTGTTGTCGATCCTCTGAGAGAGTTCTCCAAAGACAGCATCCGTCTGGTTAAACGATGCCACAAGCCGGACAGAAAGGAATTCACCAAGGTGGCAGTCCGAACTGCTATTGGCTTCGTGGTCATGGGATTTGTAGGATTCTTCGTGAAGCTGATTTTTATCCCGATCAACAATATAATCGTCGGTGCCACCTAGGGGCTCATATATGTTGGAAAAAAGGTTATCGACATCAATGCACATCTTAAGGTTTTTTATCTTGAACTTCTGTGAACTTGTTTGCTTTCCTTTGCTTTCTCTGCTTCGGTGCAACTTTGCTCTGCTTGTTATTTAAAATTCTCCTTTTTATGTGCATGCTTTTGCCATTGAGCTCGCAAATGGCAGGAAGGGATTTGTTGTACTGATAACTTTTATTTGTGGGTCATAATTTTTTTTATGTTTATTGAAATTTAATTAAACATTTACCTCATTTTACCAACTGTTCCTAAAAATTGAAGTGGCTGATTTTTATAGCATATTTAAATTGAATTATTAAAATCAGACGGTCTACATATATAATGCCAAATTTATTTGTTGG

Network for GWHGAAEX007572

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	69.610
SRP064423	SRR2545915	Juvenile tuber	87.840
SRP108465	SRR5643513	five period of Gastrodia elata	145.530
	SRR5643514	five period of Gastrodia elata	203.930
	SRR5643515	five period of Gastrodia elata	162.220
	SRR5643524	five period of Gastrodia elata	173.740
	SRR5643525	five period of Gastrodia elata	268.640
	SRR5643528	five period of Gastrodia elata	279.040
	SRR5643658	five period of Gastrodia elata	231.040
	SRR5643659	five period of Gastrodia elata	125.390
	SRR5643660	five period of Gastrodia elata	109.870
	SRR5643661	five period of Gastrodia elata	131.210
	SRR5643662	five period of Gastrodia elata	131.920
	SRR5643663	five period of Gastrodia elata	108.540
	SRR5643664	five period of Gastrodia elata	113.990
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	131.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	155.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	159.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	111.160
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	112.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	93.280
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	118.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	109.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	145.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	131.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	208.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	208.590
SRP279888	Gastro	Gastrodia elata tuber	230.63
	Juven	Juvenile tuber	136.79
	Mother_Gastro	Mother tuber of Gastrodia elata	226.99
	Mother_Juven	Mother tuber of Juvenile	163.99