Detail information of GWHGAAEX007578/evm.TU.scaffold_20.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26065.00E-58OTU (ovarian tumor)-like cysteine protease
nrgi|672135810|ref|XP_008791580.1|4.35E-96PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Phoenix dactylifera]
Swissprottr|Q8LBZ4|OTU_ARATH2.00E-72OTU domain-containing protein At3g57810
trEMBLtr|C0HEK6|C0HEK6_MAIZE1.00E-86Uncharacterized protein {ECO:0000313|EMBL:ACN25459.1}
TAIRAT3G578105.00E-58Cysteine proteinases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002628387432859707-
Transcript Sequence

Network for GWHGAAEX007578

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02338.18OTU1362554.80E-21
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyOTU

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.850
SRR2545915Juvenile tuber20.140
SRP108465SRR5643513five period of Gastrodia elata14.680
SRR5643514five period of Gastrodia elata14.360
SRR5643515five period of Gastrodia elata18.210
SRR5643524five period of Gastrodia elata16.810
SRR5643525five period of Gastrodia elata21.000
SRR5643528five period of Gastrodia elata23.450
SRR5643658five period of Gastrodia elata27.340
SRR5643659five period of Gastrodia elata16.830
SRR5643660five period of Gastrodia elata14.460
SRR5643661five period of Gastrodia elata14.730
SRR5643662five period of Gastrodia elata15.570
SRR5643663five period of Gastrodia elata15.270
SRR5643664five period of Gastrodia elata14.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.980
SRR6049655Rhizomagastrodiae_C368-T10_good_113.380
SRR6049656Rhizomagastrodiae_C368-T07_good_117.120
SRR6049657Rhizomagastrodiae_C368-T07_good_114.500
SRR6049658Rhizomagastrodiae_C368-T04_good_114.480
SRR6049659Rhizomagastrodiae_C368-T04_good_114.240
SRR6049660Rhizomagastrodiae_C368-T01_good_114.320
SRR6049661Rhizomagastrodiae_C368-T04_good_113.440
SRR6049662Rhizomagastrodiae_C368-T01_good_114.420
SRR6049663Rhizomagastrodiae_C368-T01_good_112.970
SRR6049664Rhizomagastrodiae_C368-T10_good_119.350
SRR6049665Rhizomagastrodiae_C368-T10_good_119.350
SRP279888GastroGastrodia elata tuber 13.90
JuvenJuvenile tuber11.07
Mother_GastroMother tuber of Gastrodia elata 19.61
Mother_JuvenMother tuber of Juvenile 12.63