Gene detail

Detail information of GWHGAAEX007591/evm.TU.scaffold_20.79

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743786287\|ref\|XP_010922134.1\|	6.90E-155	PREDICTED: uncharacterized protein LOC105045522 [Elaeis guineensis]
trEMBL	tr\|K4CF14\|K4CF14_SOLLC	9.00E-77	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc07g048100.1.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000026	4411172	4425317	-

Transcript Sequence
>GWHTAAEX007591 ATGGCTTGCCCTGGCTATCACTCACCCCAGTTCTCCGAGGACAATGCATGGCTCCCTGCTTGGCTTCAGCCGTACGAGCATCCTGAAAATAGGCTGCATGACAAAAGCCAAGAATTTACTTCATTTGTGGCCAAGAAATGCCAGTCTAATAATGAAAATTTATTATACAATGGGGATTATGCTCAGCCAACTACAAGTGGGGGTGTCAATTATACCGGCTGTCATTTGCATTTGTCTGGTGATGATGATGAACAAGTTGGAAGTTTTTCTTGTTCAAATGCTATGTGTTTCGGTCTACATCTTTCTGCAGCAAGCTGTTCAGAGTTATCGTATGATCAACTTAATGAACTTTCTCATTTGCGGAACTATGAAGCAAACAAATGTTTATCTGAGAAAGGTGTTTCAGGAAACCCAGAATTCACTCATGATATAGCCTGTCAGCATTCCTGCAAGGATTCAGCCCAAAAACTTAATAGCTCATCTGGAGTTTTTAAGCAAAATATATCATATGAGCCAACCTCATGTCAGTTTATCAAAACTAATCAGGATAGTGAAGGATTCCGTGAAAAACTTGATGATGAAGGCATCAAAAGTACAGTTGCAGATGATGCTGTTGAACTTTCCATTTCTGCATCTGAAGCAGTGGCTATTTCTGAAATGATGTTTAGTACTATGGAGTTTGGATCTTTTTCAGATGCAGCTCTATTTGAAATCGCTCTTCCTGTGAAACAAGCTCGAAATGAATTTGTGCTGGAAACACCTCATGAGTTTGTAGCTCATGATTTAGATGATATTGATCGGTTATCTGATTTGAATGAAGATTCCATGTCTGGTGCATTTGAAGATGTTGGTATAGCAGTTCAGAAACTTGGTGAAACTTCAAAATGTGCATTTGCTAGTAGGAAATCTTCCGACAGTGCTCAAGGTTTAGATGTCAAACAGCAGGAGATATTAAAGCCTAATTCCCATGCTCTCAATATATTAGCTGACGAAAGAAAAGAACTCAAAGAACTTCCAGAAGAGATTAAGGGAGACTATACAAGTAAAACAAATTTCCAAATATGTGACCCTTTAGACTGCAAGTTACAATCAAATAGCATGCTGGTTGATTCTCACTCTCAAATGCGAACAAGGACTTTGGATTATTTTCCTTTAAAATACTCCATGCCGTCTTTAAAAGATCATGCTCCAGTGCAGGAGCAGAAGTTTCACATTAATGATGCTTTAGCAGTACAAGAGAATCATTGTGTACCAAAGGTGGAAAAAACGTTAGAACAGGGAAATACAAATGCCAAGAAAAGATTAAAAATGTCTACTTGGGAAACCAGCTTTCTTTCAGAATCCATGAATGCCTTGGATCAAAGCGTATCACATATAATGCCATCTGTTGAACTTGCGAGGGTTTCTTCTTCAGGCATGGAGGTACAGGATTTTTCTTCTAGCTATTGCAAGGAGGATAATTTTGAAGTGCCGCTTTCACAAGATCATTCCAGCCAGTTATCACTAGCTGATTCTTTATGTTCAGCTGTTCCATGCAGCATTTCTAGTGGAAAATCTAAGGAAATTATGGATACTGTTAAAAATTCAGAGAACCCAATGACAATGATCCTCACAAAATGTTTTGATCAAAGGTCTACCTTTCAGAATAATATTATGCTGCATAATTCATTTCCAGTTCATAAAGAGCTCATTCTTTCAGAGACCAAATTTGAACAACCGAGTGTTATTTTCCACAAACTGAATTCACTCAGGCCTTACAGCTTAATGCCAGATAGCCACAAAATGGTTGGGGGAAGCCATTCTCCAAATAATCAACTGGCATTACATGGCGTAAACAATGCCGTTTTGCATGCATCTAATGAAAGAATTGTGGAACTTTCCAATATATGTGATCCAGGAAATTTTTTTGCGGGAGGTAAATCAAACAATGAAAATAGTCTTGAACAACAAAAGTTTGGAGTACCATTATCAAAATTTCAGGGCGCCGAACATGATGATAATAGAGCATTAGTGCATGAAGATACATGTGATAGGCATGAGACAATAAGAAGATTGTCCACCTTGGATTTGTGGATAGACAAATCCTATGAGCCAACTAAAGAAGCTAACTGTGGGAGTGATGCAATCAGTAAATCTCATATCTCTGAACAATTCTTTTTGCAATCATTTTCTGATGACAAAAAACCTAGGAAAAGAAGTGTCCGATTTCTGGAAGCTGCCTACAATGTGGGAAGCCCTAAGGCATCCAATTTGCACTCTAAAAGCTTAGCACAGAGTTCTTGTTCAAAGACAGCCGTACATATAGAAAATTGCTGCTTGATTGACAAATCTGTGTGTCGATTGGATCAAAATTGCAATTACTTGACTAGCAAAGGGAAAGCGAGGAACAATGAAATTATACTTGGGGGCTTGGAATTTTTGTTAACTGGATTCTCAAGTTGCAAGGCAAAGAATCTTGAAGAATTAATCAGAAAACATGGTGGATATGTTCTTCCAAATATACCATCACATTCTCCATATCTAAGAGGAATGTCCGTGAGGTCAGCATGCAGGAATCTTCCTATTGTCCTGTCTCCTAAAAAGGTTCAAACTACTAAATTTCTATATGGATGTGCGGCTAATACCTTCATGCTTAATGAATACTGGCTTGAGGATTCAATAGAATCTGGCGCTGCATTGTCACCTGGGAAGTATATGAATCGATCTATTCCTGGCTCAAAGGGAAATAAGTTGATTATTGGAGAATTTCCTTGGTCCATTACCAGCATGCCCATATTTCATAAAGTCGGGATTATGCTTCATGGAAAAGGAAAATTTTGTACCAAATTCATGAAAATTGTGAAGCATGGTGGCGGCCAGGTGTTCAAGTCTTTGCAGCGATTGGTTCAAAGTTTGAAAATTGGAACGAATACACTAGGGTTTATTCTTGTTCAGAATGATAATGGTGTTTCACGTCACTTGAAACACTGTGCATTGGAACATAATATCCCTACTGTGCCAGCGAGCTGGATGGTAAACAGTTTATTCTGCGGGAAGCTACTTTCAATTAAGAGGGAGCGTTGTGCACTGCTACATAGGATCAAGATTCCATCATTTCCCAAACGACAAGTTGATGCTGTTTTGAGTCAAGAAATATGAATTTTTCAGGTGAGGATTTTTTCTCCATTTTTCATCCCTATGGTTGAAACTTGGAACAATATCTTGCATACACCCAAATTATGAGTAATCATATAACTAATAAACATTTATATTTATAGAAGTACCACCTACTTGAGTATGAGGCTGATACTTTTTTCGAAAGAGCCTTGCTAGAAGGCAATGGTGCGGCTAATGAGATTTGAACTTCATTCCTCAAGAACAAATATCGAAGTTCCAACCAATACCATTTGTAGGTATCTATTCACTTGGATCATAACCTAGAGAATTGTTCTCAAAGCGTGTCTTTATTTAATAAGAGGGTTCAATTTTCTATCATTTTCTTGAGTTTCCATTTCATCAAAACTTTTGAGTTGCAAAAGCCATTTATCTCTTTCATCACATCAATAAAGAACCTTTTCGTACTCATTGGTGGTAAAGTGTTTAATGATTCTGTTCGCAGTAAAGCGGGGGAGCTGTTCAGATTAATTAGTGGCGGTTATTTTTGTTTTGTTTTCAAGTTTTGGGCTACTATTAGTGAACAGTATGTAAATATCCATTGTTTTTTAATCTCTTGTAAAAGGCAGTTTTATTTTTCCTTAAAGTATATGCTTGAATTCCTTTGTTAGATGCAATTTTGAGTGGTTTGTGTTGTTGACAATAAGAATGTGCAAAGGGTTTTTTGGATGTTTTAT

Network for GWHGAAEX007591

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX007591
MACPGYHSPQFSEDNAWLPAWLQPYEHPENRLHDKSQEFTSFVAKKCQSNNENLLYNGDYAQPTTSGGVNYTGCHLHLSGDDDEQVGSFSCSNAMCFGLHLSAASCSELSYDQLNELSHLRNYEANKCLSEKGVSGNPEFTHDIACQHSCKDSAQKLNSSSGVFKQNISYEPTSCQFIKTNQDSEGFREKLDDEGIKSTVADDAVELSISASEAVAISEMMFSTMEFGSFSDAALFEIALPVKQARNEFVLETPHEFVAHDLDDIDRLSDLNEDSMSGAFEDVGIAVQKLGETSKCAFASRKSSDSAQGLDVKQQEILKPNSHALNILADERKELKELPEEIKGDYTSKTNFQICDPLDCKLQSNSMLVDSHSQMRTRTLDYFPLKYSMPSLKDHAPVQEQKFHINDALAVQENHCVPKVEKTLEQGNTNAKKRLKMSTWETSFLSESMNALDQSVSHIMPSVELARVSSSGMEVQDFSSSYCKEDNFEVPLSQDHSSQLSLADSLCSAVPCSISSGKSKEIMDTVKNSENPMTMILTKCFDQRSTFQNNIMLHNSFPVHKELILSETKFEQPSVIFHKLNSLRPYSLMPDSHKMVGGSHSPNNQLALHGVNNAVLHASNERIVELSNICDPGNFFAGGKSNNENSLEQQKFGVPLSKFQGAEHDDNRALVHEDTCDRHETIRRLSTLDLWIDKSYEPTKEANCGSDAISKSHISEQFFLQSFSDDKKPRKRSVRFLEAAYNVGSPKASNLHSKSLAQSSCSKTAVHIENCCLIDKSVCRLDQNCNYLTSKGKARNNEIILGGLEFLLTGFSSCKAKNLEELIRKHGGYVLPNIPSHSPYLRGMSVRSACRNLPIVLSPKKVQTTKFLYGCAANTFMLNEYWLEDSIESGAALSPGKYMNRSIPGSKGNKLIIGEFPWSITSMPIFHKVGIMLHGKGKFCTKFMKIVKHGGGQVFKSLQRLVQSLKIGTNTLGFILVQNDNGVSRHLKHCALEHNIPTVPASWMVNSLFCGKLLSIKRERCALLHRIKIPSFPKRQVDAVLSQEI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.440
SRP064423	SRR2545915	Juvenile tuber	0.770
SRP108465	SRR5643513	five period of Gastrodia elata	2.410
	SRR5643514	five period of Gastrodia elata	2.790
	SRR5643515	five period of Gastrodia elata	2.640
	SRR5643524	five period of Gastrodia elata	2.260
	SRR5643525	five period of Gastrodia elata	1.010
	SRR5643528	five period of Gastrodia elata	0.820
	SRR5643658	five period of Gastrodia elata	0.850
	SRR5643659	five period of Gastrodia elata	6.260
	SRR5643660	five period of Gastrodia elata	7.550
	SRR5643661	five period of Gastrodia elata	11.230
	SRR5643662	five period of Gastrodia elata	11.030
	SRR5643663	five period of Gastrodia elata	8.740
	SRR5643664	five period of Gastrodia elata	4.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.900
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.760
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.790
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.680
SRP279888	Gastro	Gastrodia elata tuber	4.30
	Juven	Juvenile tuber	1.72
	Mother_Gastro	Mother tuber of Gastrodia elata	1.73
	Mother_Juven	Mother tuber of Juvenile	1.72