Detail information of GWHGAAEX007636/evm.TU.scaffold_20.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|460374988|ref|XP_004233290.1|3.78E-22PREDICTED: uncharacterized protein LOC101246891 [Solanum lycopersicum]
trEMBLtr|M1CYN8|M1CYN8_SOLTU2.00E-22Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400077632}
TAIRAT5G409608.00E-17Protein of unknown function (DUF 3339)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002671469157147121-
Transcript Sequence

Network for GWHGAAEX007636

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11820.7DUF33391662.40E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.290
SRR2545915Juvenile tuber35.230
SRP108465SRR5643513five period of Gastrodia elata107.500
SRR5643514five period of Gastrodia elata116.200
SRR5643515five period of Gastrodia elata54.180
SRR5643524five period of Gastrodia elata77.950
SRR5643525five period of Gastrodia elata1061.570
SRR5643528five period of Gastrodia elata353.810
SRR5643658five period of Gastrodia elata705.140
SRR5643659five period of Gastrodia elata93.600
SRR5643660five period of Gastrodia elata110.260
SRR5643661five period of Gastrodia elata71.640
SRR5643662five period of Gastrodia elata44.580
SRR5643663five period of Gastrodia elata30.320
SRR5643664five period of Gastrodia elata129.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.310
SRR6049655Rhizomagastrodiae_C368-T10_good_1311.200
SRR6049656Rhizomagastrodiae_C368-T07_good_1119.640
SRR6049657Rhizomagastrodiae_C368-T07_good_1141.590
SRR6049658Rhizomagastrodiae_C368-T04_good_1164.120
SRR6049659Rhizomagastrodiae_C368-T04_good_1256.560
SRR6049660Rhizomagastrodiae_C368-T01_good_184.330
SRR6049661Rhizomagastrodiae_C368-T04_good_195.830
SRR6049662Rhizomagastrodiae_C368-T01_good_152.160
SRR6049663Rhizomagastrodiae_C368-T01_good_166.740
SRR6049664Rhizomagastrodiae_C368-T10_good_153.180
SRR6049665Rhizomagastrodiae_C368-T10_good_153.180
SRP279888GastroGastrodia elata tuber 48.26
JuvenJuvenile tuber407.01
Mother_GastroMother tuber of Gastrodia elata 80.48
Mother_JuvenMother tuber of Juvenile 37.81