Gene detail

Detail information of GWHGAAEX007647/evm.TU.scaffold_20.158

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|383763408\|ref\|YP_005442390.1\|	4.00E-77	potassium transport protein Kup [Caldilinea aerophila DSM 14535 = NBRC 104270]
nr	gi\|743812723\|ref\|XP_010929506.1\|	0	PREDICTED: potassium transporter 5 [Elaeis guineensis]
Swissprot	tr\|Q5JK32\|HAK5_ORYSJ	0	Potassium transporter 5
trEMBL	tr\|A0A061E3F6\|A0A061E3F6_THECC	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT1G60160	0	Potassium transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000026	7628202	7653487	-

Transcript Sequence
>GWHTAAEX007647 TTAAGTGCTATGTTCATAAAAATTCCTTATAATTTAGATCAAATTTGAGTAGACTTGCAACTAATGATTAAACAGATTTCGACACAAACTAAGAATTATTATTTCCATCTTGGGTTAATCGAGCCGAGTTCAATCAAATGAATCTGATTTGAGTAAAACGAGATAATACCAAGTATGCCAAAAAATTATAGCATCCCTTACAACAAATGTATCAAACAGATCATATTCAAATTAATCAAGTATGTTTTTTCATGGTCAGTTTCTTAAACGCCTGTATATCAACCAATTGAGTTCAGGTCAAGCATTTTTATGTCCGGAAAATTTCAATCGTGACTGGAACACAACTTGTGAATCAGTTTTAATGTACCGGTACATTGTGTCTATATAAAATCATTAATAACCTAGCCACTTTCACTTGAATATAGCATGAAATATATTCAAATCTTTAAAATTCCCTTTGCTCTCTCTCTCTCTCTTACACACTCGCAGGAAAATCTTTTGGCTCAATAGCCATAAGCAACAACAATAGCCCTTAGTCTACCCAGATCCTCATGTTTATTTTTAAAGCATTGTAATAAAACTAAAACTTTTGTAACTCAAGTTAATTCAAGATAATATTATTTTCTAAGCAAAAATTGAATATAATTATTGATACTGTTTCTGCAGGAGGAACATTTGCATTATACTCTCTAATATCTCGCCACGCAAAGATCAGCTTGATACCAAATCATCAGGTTGAAGATGCAATGCTTTCAAACTACAAATTAGAAACGCCAACAACCAAATTCAAAAGAGCTCAATGGATCAAGCATAAACTTGAGAGCAGCAAAATATTGCAAGTTGCCCTTTTTCTTACAACAATCTTAGCAACTTCAATGATAATTGGTGATGGCGTCTTAACTCCAGCCATCTCTGTACTTTCAGCAGTGAGCGGGATAAAAGAGAAAGCATCATCTTTGTCACAAGGGCACATTGCTTTACTCTCCATAGTTATCTTGGTGTTTGTGTTCTCAGTTCAACGTTTCGGCACTGACAAAGTTGGATACACATTTGCACCTGTTATAATACTTTGGTGCAGTTTGATTGGTGGCATCGGGATCTATAATTTAGTTAAATATGATTTTCGAGTTCTCCGTGCATTCAACCCAAAGTATATTGTCGACTACATCAAAAGAAACGGTAGTAAAGCATGGACCTCTCTAGGTGGTGTTGTGCTGTGTATTACAGGAACTGAAGCCATGTTTGCAGATCTAAGTCACTTCAGCGTTAGATCAATTCAGATAAGCTTCACCGCAGTTTTGTTTCCAGCAATATTACTGTCCTATATTGGACAAGCTTCATATCTTACAAAATTTCCAGAAGAAGTTGGTGATGTTTTCTATAAATCAGTTCCAGGTCCGCTATTCTGGCCAAGTTTCATAGTAGCCATAGCTGCTGCAATAATTGCAAGCCAGGCCATGATAACTGGTACATTTTCTATCATTCAACAATCTCAAGGTCTATCTAGCTTTCCAACAGTAACAATTGTCCACACATCTACAAAATACGAGGGGCAGGTGTACATTCCAGAGGTAAATTATGCCTTGATGGTTGCCTGCATATTAGTGACGGGAATTTTTAGAAGCACGACAAACATTGGAAATGCATATGGAATTGCAGTCGTTTCTGTTATGCTAATAACAACAGCATTGGTGGCCCTAGTGATGCTCTTGATATGGAAAACTAGCATTTGGGGGATTTCATTGTTTGTGATAGTTATAGGCGGAATAGAAACCATATATTTATCTGCAGTTCTATCGAAGTTTGTAAACGGTGGCTTCATGCCTTTAGTGCTTGCACTTTTTCTCATGCTAATAATGAGCATATGGCATTATGTCCATGTCAAACGTTACAATTTTGAGCTCGAACACAAAGTTTCAAGCGAATATATACAAGCATTGGCATATGATAGAAGCATAACAAGAATACCAGGAATTGGGCTTCTATACTCGGACCTAGTTCAAGGCATCCCACCAATATTTCCTCACTTCATCCAAAAGATACCGTCAATCCACTCAGTTTTTGTGTTCGTTTCAGTGAAACATCTTCCCATAAGCAAAGTTGAACCGCCTGAACGCTTTTTTTTCCAACAAATTGAACCAAGAGAGTTCAGGTTGTTCAGATGTGTGGTTCGCTATGGATATAAAGATGTTAGAGAAGCAGTGAAGGATTTTGAGATGGCACTCATTAAACAGCTGAAAGAATTCATCCATCATGAATTCTTCATTCAAGAGGGAAGTGCACCGTTGCAAACCTATCCAATGGAAGAGTCAGAGGCCCTTGCAAGCTTAGTTGTGGAACCAACATTAAGTAGCCGGCATCAAACAGTATCGGGCACAATACATGCAGATGAAACACTAAAAGCACAAGGCTCGGCTCATAGTTCTTCTAGCTCAATACTTCCTGCTAATAGCAACCAATCAGTAAAGTTTTCAAGTAGACAAGTTGTTGCAGCAATTCCAGCCATGGAAGAGGAGAAACAGTTCATTCAAAAAGAAATGGAAAAGGGAATAGTGTATCTTCTAGGAGAAACGGAAATGGTAGCAAAGCCCAGTTCTTCTATCATTAAGCAAGTGATAGTCAACAATATCTATCACTTTATAAAGCGAAACTTCAGGCAAGGAGAAGAGATTATGTCAATTCCAAAAGCCAGGCTTCTCAAGGTTGGAATAACATATGAAATATAGATAATACTTTGATTCCCCCAGCATGTTGCCCAGATTTTATAGGATTATAAGAAATATTTAATAAGAAAAAGCTGTGTTCATTAAAACTCCAAGA

Network for GWHGAAEX007647

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module12

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	20	481	2.90E-153

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.120
SRP064423	SRR2545915	Juvenile tuber	3.980
SRP108465	SRR5643513	five period of Gastrodia elata	4.910
	SRR5643514	five period of Gastrodia elata	2.410
	SRR5643515	five period of Gastrodia elata	4.900
	SRR5643524	five period of Gastrodia elata	3.160
	SRR5643525	five period of Gastrodia elata	2.410
	SRR5643528	five period of Gastrodia elata	0.840
	SRR5643658	five period of Gastrodia elata	1.020
	SRR5643659	five period of Gastrodia elata	1.880
	SRR5643660	five period of Gastrodia elata	1.990
	SRR5643661	five period of Gastrodia elata	1.660
	SRR5643662	five period of Gastrodia elata	1.220
	SRR5643663	five period of Gastrodia elata	0.970
	SRR5643664	five period of Gastrodia elata	0.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.380
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.060
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.220
SRP279888	Gastro	Gastrodia elata tuber	2.78
	Juven	Juvenile tuber	1.93
	Mother_Gastro	Mother tuber of Gastrodia elata	30.62
	Mother_Juven	Mother tuber of Juvenile	4.60