Detail information of GWHGAAEX007661/evm.TU.scaffold_200.5
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|407641457|ref|YP_006805216.1| | 7.00E-23 | serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358] |
| KOG | KOG1187 | 5.00E-75 | Serine/threonine protein kinase |
| nr | gi|326511659|dbj|BAJ91974.1| | 2.09E-94 | predicted protein [Hordeum vulgare subsp. vulgare] |
| Swissprot | tr|B3LFC0|Y1332_ARATH | 9.00E-78 | Probable receptor-like protein kinase At1g33260 |
| trEMBL | tr|F2CYC7|F2CYC7_HORVD | 8.00E-95 | Predicted protein {ECO:0000313|EMBL:BAJ87848.1} |
| TAIR | AT1G33260 | 5.00E-75 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000198 | 154037 | 155074 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007661
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 68 | 323 | 9.20E-35 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XIII |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.550 |
| SRR2545915 | Juvenile tuber | 6.320 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 71.350 |
| SRR5643514 | five period of Gastrodia elata | 55.250 | |
| SRR5643515 | five period of Gastrodia elata | 47.670 | |
| SRR5643524 | five period of Gastrodia elata | 54.600 | |
| SRR5643525 | five period of Gastrodia elata | 17.370 | |
| SRR5643528 | five period of Gastrodia elata | 29.420 | |
| SRR5643658 | five period of Gastrodia elata | 46.550 | |
| SRR5643659 | five period of Gastrodia elata | 41.740 | |
| SRR5643660 | five period of Gastrodia elata | 61.690 | |
| SRR5643661 | five period of Gastrodia elata | 43.840 | |
| SRR5643662 | five period of Gastrodia elata | 45.440 | |
| SRR5643663 | five period of Gastrodia elata | 46.140 | |
| SRR5643664 | five period of Gastrodia elata | 31.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 51.660 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.070 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.490 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.930 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.940 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.200 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.130 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.510 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 46.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 46.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 36.62 |
| Juven | Juvenile tuber | 8.14 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 83.59 | |
| Mother_Juven | Mother tuber of Juvenile | 8.26 |