Detail information of GWHGAAEX007662/evm.TU.scaffold_200.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|192361685|ref|YP_001983794.1|1.00E-121alcohol dehydrogenase [Cellvibrio japonicus Ueda107]
KOGKOG00222.00E-142Alcohol dehydrogenase, class III
nrgi|672148790|ref|XP_008797217.1|0PREDICTED: alcohol dehydrogenase-like 6 [Phoenix dactylifera]
Swissprottr|Q8LEB2|ADHL6_ARATH0Alcohol dehydrogenase-like 6
trEMBLtr|M0SS01|M0SS01_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P25400_001}
TAIRAT1G771202.00E-142alcohol dehydrogenase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000198225932261644+
Transcript Sequence

Network for GWHGAAEX007662

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N651895.30E-22
PF00107.25ADH_zinc_N2333621.10E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00001E1.1.1.1, adh Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.620
SRR2545915Juvenile tuber41.090
SRP108465SRR5643513five period of Gastrodia elata49.930
SRR5643514five period of Gastrodia elata48.170
SRR5643515five period of Gastrodia elata39.400
SRR5643524five period of Gastrodia elata44.220
SRR5643525five period of Gastrodia elata65.020
SRR5643528five period of Gastrodia elata62.930
SRR5643658five period of Gastrodia elata62.920
SRR5643659five period of Gastrodia elata37.580
SRR5643660five period of Gastrodia elata34.180
SRR5643661five period of Gastrodia elata32.620
SRR5643662five period of Gastrodia elata34.680
SRR5643663five period of Gastrodia elata38.610
SRR5643664five period of Gastrodia elata34.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.100
SRR6049655Rhizomagastrodiae_C368-T10_good_132.450
SRR6049656Rhizomagastrodiae_C368-T07_good_145.310
SRR6049657Rhizomagastrodiae_C368-T07_good_138.290
SRR6049658Rhizomagastrodiae_C368-T04_good_137.520
SRR6049659Rhizomagastrodiae_C368-T04_good_133.940
SRR6049660Rhizomagastrodiae_C368-T01_good_138.990
SRR6049661Rhizomagastrodiae_C368-T04_good_139.080
SRR6049662Rhizomagastrodiae_C368-T01_good_155.870
SRR6049663Rhizomagastrodiae_C368-T01_good_149.790
SRR6049664Rhizomagastrodiae_C368-T10_good_147.670
SRR6049665Rhizomagastrodiae_C368-T10_good_147.670
SRP279888GastroGastrodia elata tuber 46.05
JuvenJuvenile tuber48.24
Mother_GastroMother tuber of Gastrodia elata 51.83
Mother_JuvenMother tuber of Juvenile 26.87