Detail information of GWHGAAEX007666/evm.TU.scaffold_200.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|375147321|ref|YP_005009762.1|3.00E-41MIP family channel protein [Niastella koreensis GR20-10]
KOGKOG02232.00E-144Aquaporin (major intrinsic protein family)
nrgi|694995537|ref|XP_009389176.1|1.54E-170PREDICTED: probable aquaporin NIP5-1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ATN1|NIP31_MAIZE2.00E-149Aquaporin NIP3-1
trEMBLtr|M0RWX1|M0RWX1_MUSAM6.00E-166Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P04130_001}
TAIRAT4G103802.00E-144NOD26-like intrinsic protein 5;1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000198328938333369-
Transcript Sequence

Network for GWHGAAEX007666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP672751.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms165.870
SRR2545915Juvenile tuber377.690
SRP108465SRR5643513five period of Gastrodia elata594.540
SRR5643514five period of Gastrodia elata505.030
SRR5643515five period of Gastrodia elata504.780
SRR5643524five period of Gastrodia elata566.720
SRR5643525five period of Gastrodia elata1466.830
SRR5643528five period of Gastrodia elata997.470
SRR5643658five period of Gastrodia elata1560.590
SRR5643659five period of Gastrodia elata642.640
SRR5643660five period of Gastrodia elata725.350
SRR5643661five period of Gastrodia elata782.720
SRR5643662five period of Gastrodia elata670.540
SRR5643663five period of Gastrodia elata573.250
SRR5643664five period of Gastrodia elata645.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1336.770
SRR6049655Rhizomagastrodiae_C368-T10_good_1410.510
SRR6049656Rhizomagastrodiae_C368-T07_good_1404.670
SRR6049657Rhizomagastrodiae_C368-T07_good_1288.590
SRR6049658Rhizomagastrodiae_C368-T04_good_1258.670
SRR6049659Rhizomagastrodiae_C368-T04_good_1235.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1312.210
SRR6049661Rhizomagastrodiae_C368-T04_good_1281.730
SRR6049662Rhizomagastrodiae_C368-T01_good_1584.320
SRR6049663Rhizomagastrodiae_C368-T01_good_1471.420
SRR6049664Rhizomagastrodiae_C368-T10_good_1677.470
SRR6049665Rhizomagastrodiae_C368-T10_good_1677.470
SRP279888GastroGastrodia elata tuber 1,268.47
JuvenJuvenile tuber325.63
Mother_GastroMother tuber of Gastrodia elata 569.77
Mother_JuvenMother tuber of Juvenile 198.17