Detail information of GWHGAAEX007673/evm.TU.scaffold_200.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04392.00E-87VAMP-associated protein involved in inositol metabolism
nrgi|695074928|ref|XP_009384687.1|4.34E-103PREDICTED: vesicle-associated protein 2-1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LVU1|VAP21_ARATH5.00E-88Vesicle-associated protein 2-1, N-terminally processed
trEMBLtr|M0RUN4|M0RUN4_MUSAM2.00E-103Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P23040_001}
TAIRAT5G471802.00E-87Plant VAMP (vesicle-associated membrane protein) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000198664208670095-
Transcript Sequence

Network for GWHGAAEX007673

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00635.25Motile_Sperm71032.20E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.130
SRR2545915Juvenile tuber46.390
SRP108465SRR5643513five period of Gastrodia elata25.520
SRR5643514five period of Gastrodia elata26.500
SRR5643515five period of Gastrodia elata24.520
SRR5643524five period of Gastrodia elata28.710
SRR5643525five period of Gastrodia elata114.580
SRR5643528five period of Gastrodia elata171.950
SRR5643658five period of Gastrodia elata121.260
SRR5643659five period of Gastrodia elata29.690
SRR5643660five period of Gastrodia elata33.450
SRR5643661five period of Gastrodia elata32.160
SRR5643662five period of Gastrodia elata35.660
SRR5643663five period of Gastrodia elata41.140
SRR5643664five period of Gastrodia elata42.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.940
SRR6049655Rhizomagastrodiae_C368-T10_good_143.670
SRR6049656Rhizomagastrodiae_C368-T07_good_129.580
SRR6049657Rhizomagastrodiae_C368-T07_good_138.630
SRR6049658Rhizomagastrodiae_C368-T04_good_141.960
SRR6049659Rhizomagastrodiae_C368-T04_good_145.600
SRR6049660Rhizomagastrodiae_C368-T01_good_132.330
SRR6049661Rhizomagastrodiae_C368-T04_good_137.150
SRR6049662Rhizomagastrodiae_C368-T01_good_129.610
SRR6049663Rhizomagastrodiae_C368-T01_good_134.100
SRR6049664Rhizomagastrodiae_C368-T10_good_134.200
SRR6049665Rhizomagastrodiae_C368-T10_good_134.200
SRP279888GastroGastrodia elata tuber 49.06
JuvenJuvenile tuber32.39
Mother_GastroMother tuber of Gastrodia elata 226.29
Mother_JuvenMother tuber of Juvenile 118.53