Detail information of GWHGAAEX007679/evm.TU.scaffold_200.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695005603|ref|XP_009389260.1|1.32E-123PREDICTED: uncharacterized protein LOC103975867 isoform X2 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S6T9|M0S6T9_MUSAM2.00E-122Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P10480_001}
TAIRAT3G603002.00E-26RWD domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000198832738893673+
Transcript Sequence

Network for GWHGAAEX007679

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05773.21RWD71074.30E-10
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.850
SRR2545915Juvenile tuber74.130
SRP108465SRR5643513five period of Gastrodia elata33.490
SRR5643514five period of Gastrodia elata30.780
SRR5643515five period of Gastrodia elata35.690
SRR5643524five period of Gastrodia elata28.040
SRR5643525five period of Gastrodia elata47.830
SRR5643528five period of Gastrodia elata63.490
SRR5643658five period of Gastrodia elata59.510
SRR5643659five period of Gastrodia elata59.370
SRR5643660five period of Gastrodia elata66.650
SRR5643661five period of Gastrodia elata43.880
SRR5643662five period of Gastrodia elata57.320
SRR5643663five period of Gastrodia elata73.950
SRR5643664five period of Gastrodia elata69.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.940
SRR6049655Rhizomagastrodiae_C368-T10_good_148.630
SRR6049656Rhizomagastrodiae_C368-T07_good_142.170
SRR6049657Rhizomagastrodiae_C368-T07_good_145.650
SRR6049658Rhizomagastrodiae_C368-T04_good_139.640
SRR6049659Rhizomagastrodiae_C368-T04_good_141.450
SRR6049660Rhizomagastrodiae_C368-T01_good_136.970
SRR6049661Rhizomagastrodiae_C368-T04_good_136.340
SRR6049662Rhizomagastrodiae_C368-T01_good_126.440
SRR6049663Rhizomagastrodiae_C368-T01_good_126.690
SRR6049664Rhizomagastrodiae_C368-T10_good_131.920
SRR6049665Rhizomagastrodiae_C368-T10_good_131.920
SRP279888GastroGastrodia elata tuber 58.77
JuvenJuvenile tuber31.89
Mother_GastroMother tuber of Gastrodia elata 20.05
Mother_JuvenMother tuber of Juvenile 20.71