Detail information of GWHGAAEX007683/evm.TU.scaffold_200.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695028542|ref|XP_009401653.1|1.95E-71PREDICTED: ethylene-responsive transcription factor 2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LW50|ERF2_NICSY7.00E-54Ethylene-responsive transcription factor 2
trEMBLtr|M0T0D4|M0T0D4_MUSAM1.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P21050_001}
TAIRAT4G175003.00E-53ethylene responsive element binding factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019811286161129614-
Transcript Sequence

Network for GWHGAAEX007683

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2951455.00E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms163.740
SRR2545915Juvenile tuber273.550
SRP108465SRR5643513five period of Gastrodia elata99.450
SRR5643514five period of Gastrodia elata94.330
SRR5643515five period of Gastrodia elata383.980
SRR5643524five period of Gastrodia elata101.530
SRR5643525five period of Gastrodia elata554.310
SRR5643528five period of Gastrodia elata864.260
SRR5643658five period of Gastrodia elata397.280
SRR5643659five period of Gastrodia elata509.710
SRR5643660five period of Gastrodia elata322.020
SRR5643661five period of Gastrodia elata401.050
SRR5643662five period of Gastrodia elata399.360
SRR5643663five period of Gastrodia elata236.820
SRR5643664five period of Gastrodia elata601.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1415.450
SRR6049655Rhizomagastrodiae_C368-T10_good_1245.650
SRR6049656Rhizomagastrodiae_C368-T07_good_1192.910
SRR6049657Rhizomagastrodiae_C368-T07_good_1367.860
SRR6049658Rhizomagastrodiae_C368-T04_good_1329.800
SRR6049659Rhizomagastrodiae_C368-T04_good_1477.340
SRR6049660Rhizomagastrodiae_C368-T01_good_1513.270
SRR6049661Rhizomagastrodiae_C368-T04_good_1290.480
SRR6049662Rhizomagastrodiae_C368-T01_good_1194.210
SRR6049663Rhizomagastrodiae_C368-T01_good_1415.050
SRR6049664Rhizomagastrodiae_C368-T10_good_1173.960
SRR6049665Rhizomagastrodiae_C368-T10_good_1173.960
SRP279888GastroGastrodia elata tuber 209.43
JuvenJuvenile tuber37.00
Mother_GastroMother tuber of Gastrodia elata 957.86
Mother_JuvenMother tuber of Juvenile 394.69