Detail information of GWHGAAEX007687/evm.TU.scaffold_200.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 2.00E-12 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| KOG | KOG1187 | 1.00E-95 | Serine/threonine protein kinase |
| nr | gi|743778423|ref|XP_010919672.1| | 3.11E-132 | PREDICTED: putative kinase-like protein TMKL1 [Elaeis guineensis] |
| Swissprot | tr|P33543|TMKL1_ARATH | 2.00E-53 | Putative kinase-like protein TMKL1 (Precursor) |
| trEMBL | tr|M0RW77|M0RW77_MUSAM | 6.00E-123 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P01690_001} |
| TAIR | AT5G07620 | 1.00E-95 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000198 | 1399592 | 1402119 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007687
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 129 | 351 | 3.00E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-III |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.310 |
| SRR2545915 | Juvenile tuber | 1.300 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.280 |
| SRR5643514 | five period of Gastrodia elata | 4.330 | |
| SRR5643515 | five period of Gastrodia elata | 4.470 | |
| SRR5643524 | five period of Gastrodia elata | 3.560 | |
| SRR5643525 | five period of Gastrodia elata | 8.810 | |
| SRR5643528 | five period of Gastrodia elata | 6.990 | |
| SRR5643658 | five period of Gastrodia elata | 6.010 | |
| SRR5643659 | five period of Gastrodia elata | 9.560 | |
| SRR5643660 | five period of Gastrodia elata | 11.520 | |
| SRR5643661 | five period of Gastrodia elata | 9.650 | |
| SRR5643662 | five period of Gastrodia elata | 10.240 | |
| SRR5643663 | five period of Gastrodia elata | 8.310 | |
| SRR5643664 | five period of Gastrodia elata | 7.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.950 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.230 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.400 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.380 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.770 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.180 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.08 |
| Juven | Juvenile tuber | 1.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.44 | |
| Mother_Juven | Mother tuber of Juvenile | 1.39 |