Detail information of GWHGAAEX007689/evm.TU.scaffold_200.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|32472118|ref|NP_865112.1|1.00E-32dual specificity phosphatase MKP-5 [Rhodopirellula baltica SH 1]
KOGKOG17193.00E-95Dual specificity phosphatase
nrgi|720062098|ref|XP_010275392.1|5.32E-129PREDICTED: putative dual specificity protein phosphatase DSP8 [Nelumbo nucifera]
Swissprottr|Q9ZQP1|DSP8_ARATH1.00E-104Putative dual specificity protein phosphatase DSP8
trEMBLtr|W9SEA4|W9SEA4_9ROSA2.00E-118Protein-tyrosine phosphatase mitochondrial 1-like protein {ECO:0000313|EMBL:EXC02093.1}
TAIRAT2G356803.00E-95Phosphotyrosine protein phosphatases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019814052461427289-
Transcript Sequence

Network for GWHGAAEX007689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00782.19DSPc1082047.20E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006470Biological Processprotein dephosphorylation
GO:0016311Biological Processdephosphorylation
GO:0004725Molecular Functionprotein tyrosine phosphatase activity
GO:0016791Molecular Functionphosphatase activity
GO:0008138Molecular Functionprotein tyrosine/serine/threonine phosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.450
SRR2545915Juvenile tuber48.720
SRP108465SRR5643513five period of Gastrodia elata48.160
SRR5643514five period of Gastrodia elata39.800
SRR5643515five period of Gastrodia elata46.480
SRR5643524five period of Gastrodia elata46.170
SRR5643525five period of Gastrodia elata101.420
SRR5643528five period of Gastrodia elata89.710
SRR5643658five period of Gastrodia elata96.790
SRR5643659five period of Gastrodia elata47.660
SRR5643660five period of Gastrodia elata51.900
SRR5643661five period of Gastrodia elata59.030
SRR5643662five period of Gastrodia elata56.220
SRR5643663five period of Gastrodia elata51.530
SRR5643664five period of Gastrodia elata58.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.710
SRR6049655Rhizomagastrodiae_C368-T10_good_129.020
SRR6049656Rhizomagastrodiae_C368-T07_good_135.740
SRR6049657Rhizomagastrodiae_C368-T07_good_147.410
SRR6049658Rhizomagastrodiae_C368-T04_good_132.640
SRR6049659Rhizomagastrodiae_C368-T04_good_136.900
SRR6049660Rhizomagastrodiae_C368-T01_good_132.520
SRR6049661Rhizomagastrodiae_C368-T04_good_132.260
SRR6049662Rhizomagastrodiae_C368-T01_good_131.870
SRR6049663Rhizomagastrodiae_C368-T01_good_126.820
SRR6049664Rhizomagastrodiae_C368-T10_good_144.250
SRR6049665Rhizomagastrodiae_C368-T10_good_144.250
SRP279888GastroGastrodia elata tuber 42.26
JuvenJuvenile tuber60.36
Mother_GastroMother tuber of Gastrodia elata 70.40
Mother_JuvenMother tuber of Juvenile 46.44