Detail information of GWHGAAEX007696/evm.TU.scaffold_201.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01681.00E-09Putative ubiquitin fusion degradation protein
nrgi|672120800|ref|XP_008783678.1|3.31E-15PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Phoenix dactylifera]
Swissprottr|Q6WWW4|UPL3_ARATH3.00E-10E3 ubiquitin-protein ligase UPL3
trEMBLtr|M0SYE5|M0SYE5_MUSAM1.00E-12Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P14160_001}
TAIRAT4G386101.00E-09Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208123101123692-
Transcript Sequence

Network for GWHGAAEX007696

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10590TRIP12 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.770
SRR2545915Juvenile tuber2.870
SRP108465SRR5643513five period of Gastrodia elata3.760
SRR5643514five period of Gastrodia elata2.250
SRR5643515five period of Gastrodia elata2.500
SRR5643524five period of Gastrodia elata3.910
SRR5643525five period of Gastrodia elata2.690
SRR5643528five period of Gastrodia elata3.020
SRR5643658five period of Gastrodia elata3.940
SRR5643659five period of Gastrodia elata5.180
SRR5643660five period of Gastrodia elata5.500
SRR5643661five period of Gastrodia elata4.580
SRR5643662five period of Gastrodia elata5.860
SRR5643663five period of Gastrodia elata5.290
SRR5643664five period of Gastrodia elata4.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.290
SRR6049655Rhizomagastrodiae_C368-T10_good_110.140
SRR6049656Rhizomagastrodiae_C368-T07_good_110.330
SRR6049657Rhizomagastrodiae_C368-T07_good_19.910
SRR6049658Rhizomagastrodiae_C368-T04_good_113.750
SRR6049659Rhizomagastrodiae_C368-T04_good_116.770
SRR6049660Rhizomagastrodiae_C368-T01_good_110.530
SRR6049661Rhizomagastrodiae_C368-T04_good_113.480
SRR6049662Rhizomagastrodiae_C368-T01_good_116.210
SRR6049663Rhizomagastrodiae_C368-T01_good_112.100
SRR6049664Rhizomagastrodiae_C368-T10_good_17.680
SRR6049665Rhizomagastrodiae_C368-T10_good_17.680
SRP279888GastroGastrodia elata tuber 10.06
JuvenJuvenile tuber3.93
Mother_GastroMother tuber of Gastrodia elata 7.97
Mother_JuvenMother tuber of Juvenile 4.05