Detail information of GWHGAAEX007700/evm.TU.scaffold_201.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428311946|ref|YP_007122923.1|2.00E-132N-acetylglutamate kinase [Microcoleus sp. PCC 7113]
KOGKOG24363.00E-139Acetylglutamate kinase/acetylglutamate synthase
nrgi|743845785|ref|XP_010938673.1|0PREDICTED: acetylglutamate kinase, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q9SCL7|NAGK_ARATH8.00E-140Acetylglutamate kinase, chloroplastic (Precursor)
trEMBLtr|I1J0C3|I1J0C3_BRADI5.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G17650.2}
TAIRAT3G575603.00E-139N-acetyl-l-glutamate kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208193091194119+
Transcript Sequence

Network for GWHGAAEX007700

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00696.27AA_kinase813184.50E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00930argB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0006526Biological Processarginine biosynthetic process
GO:0003991Molecular Functionacetylglutamate kinase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.300
SRR2545915Juvenile tuber5.740
SRP108465SRR5643513five period of Gastrodia elata17.970
SRR5643514five period of Gastrodia elata17.240
SRR5643515five period of Gastrodia elata14.720
SRR5643524five period of Gastrodia elata17.560
SRR5643525five period of Gastrodia elata34.710
SRR5643528five period of Gastrodia elata31.600
SRR5643658five period of Gastrodia elata31.340
SRR5643659five period of Gastrodia elata22.230
SRR5643660five period of Gastrodia elata19.320
SRR5643661five period of Gastrodia elata22.630
SRR5643662five period of Gastrodia elata25.650
SRR5643663five period of Gastrodia elata20.870
SRR5643664five period of Gastrodia elata25.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.120
SRR6049655Rhizomagastrodiae_C368-T10_good_124.010
SRR6049656Rhizomagastrodiae_C368-T07_good_119.370
SRR6049657Rhizomagastrodiae_C368-T07_good_119.230
SRR6049658Rhizomagastrodiae_C368-T04_good_115.580
SRR6049659Rhizomagastrodiae_C368-T04_good_118.720
SRR6049660Rhizomagastrodiae_C368-T01_good_119.780
SRR6049661Rhizomagastrodiae_C368-T04_good_115.600
SRR6049662Rhizomagastrodiae_C368-T01_good_116.680
SRR6049663Rhizomagastrodiae_C368-T01_good_117.550
SRR6049664Rhizomagastrodiae_C368-T10_good_121.290
SRR6049665Rhizomagastrodiae_C368-T10_good_121.290
SRP279888GastroGastrodia elata tuber 19.83
JuvenJuvenile tuber28.54
Mother_GastroMother tuber of Gastrodia elata 27.07
Mother_JuvenMother tuber of Juvenile 18.96