Gene detail

Detail information of GWHGAAEX007708/evm.TU.scaffold_201.29

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|109896741\|ref\|YP_659996.1\|	6.00E-19	HAD family hydrolase [Pseudoalteromonas atlantica T6c]
nr	gi\|672131815\|ref\|XP_008789473.1\|	1.20E-111	PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q8RYE9\|GPPL3_ARATH	2.00E-103	Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255
trEMBL	tr\|B4FXA2\|B4FXA2_MAIZE	8.00E-108	Uncharacterized protein {ECO:0000313\|EMBL:ACF86745.1, ECO:0000313\|EnsemblPlants:GRMZM2G084984_P01}
TAIR	AT2G33250	1.00E-88	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000208	592138	624769	-

Transcript Sequence
>GWHTAAEX007708 GAAATATAGTAAATAATTTATGTGATTCAGTATAAACATATTTGTTCATGTGGAAGAGAGAAAAGGAAAAATTTACTACAATGAAAAAATATTACAAATTTATGTTTCCAAATTTTATTAAAAGAGAATCTTTTCAACTCTTGTAGTGTCACATACTTTTTTACTTCAAAAAATTATAATCTCTTTCAGATTTGAGATGGAGGATGAACAATCCAAATCTTTCGTTAACCCTAGATTATTATTTAAGCTTATATAGACCCCAAAATGAATCCTGTAAAATTATGGTGCTGAAGCACGCCCCGGCGAGCGCACGCCTTATCAAGCGTCAGCACTGCGGCGTACGCTGGAGCCCACCTTTCGAGCTCCTGCGGCTTGCCCCGGAGCCCTAGAGCTCCAGGCGCTACGGACTGACTTCATCAAGCTCTCAGTTTAAAAAGAAAAGTTATCTTGCATTCCCCGTGTCAGAATCTTTTATTCACAGGCTGCTTCAGTGTTCTCCGAATAAAATGCTTGTTGGTCGCTTGGCAGCATCCCCCCGCTTCACTGCTAGATCTCCATTCTCTCTTCTTCTTTGCAAGCCTGCCATGTCGTTGGCGTTGAGGAGGAGCGGCGATGCAGAGGGGAAGCCGGCGCTGAGGGGCGTTGTGTTCGACATGGACGGGACGCTCACTGTGCCGGTGATGGATTTCTCGGCTCTGCATAGATCCGTTCTGGGGGACGAGGGCTATGCGTCGGCTAAGTCCAAGAGTTCGGGCGGAAGCTTGGATATTCTCCATCTCATCGAAACTTGGACGCCTCAGGAGCAGAAGCGCGCCTATGAGATCATCGCCGATTTCGAGCGACAAGCTTTGGACCGCCTCCAGATCATGCCCGGTGCAGCTGAGCTCTGTGAGTATATAGATTCAAAGCAAATGAGAAGGGGATTGATCACTCGCAATGTAAAGGCTTCAGTAGACTTGTTCCATCGAAGATTTGGGTCTAAGTTTGCTCCAGCATTGAGCAGGGAATTTCGTCCATACAAGCCCAACCCAGCTCCCTTGTTGCACATTTGTTCTTCTTGGGGTATTCCACCTAATGAAGTTTTGATGATAGGTGATAGTCTTCGGGATGATGTGACATGTGGCAGGCGGGCAGGGTCCTTGACTTGCTTGTTGGATCAAGGTGGGCAGTACGGCCCTCCAGATTCCTTACCTGATGTACAAAGGCCTGATTTCAGGGTCTCTTCACTTGCTGAATTACACTCTTTGCTCGATGTATATTTTGAGCTGCTGCCCCATCCCACCATGCCCCCCCTTTAATATGAGATTTCATGATCTTTGTGAAATATCATCTTTTTTTGTAATTCTGCAGAAAAATTGTTTTAAAGAGCCTTGAATGAGATATTTGGCGAGAACTTATATAATTATTAAAAAATGATATAATCATGACTCATAATTGTATCTAACCAACTTCATATTAATAACAGGATTTGACATTGTGTGGGTGAGGTTGGGTGTTATTTATAAATTTGTAGGATTAGAGGGTTGGATATGTGAATTATAAAGGTTTGGTAGAATTTCTTGGATTTTAGATGGTCGGCCTCACATGGGGCTAGGAAATTACTTGAGCTCTATTGTGCATAAATGAAGGATTATTTATAGGCCTTAGTAGCGAGATAGATAAAAAATCTAGTTGTGTGCATGCGGCAAAGACTTAGAAATGAGATGAAG

Network for GWHGAAEX007708

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13419.5	HAD_2	46	212	5.50E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.320
SRP064423	SRR2545915	Juvenile tuber	28.280
SRP108465	SRR5643513	five period of Gastrodia elata	42.530
	SRR5643514	five period of Gastrodia elata	33.410
	SRR5643515	five period of Gastrodia elata	37.150
	SRR5643524	five period of Gastrodia elata	35.060
	SRR5643525	five period of Gastrodia elata	50.320
	SRR5643528	five period of Gastrodia elata	39.010
	SRR5643658	five period of Gastrodia elata	43.110
	SRR5643659	five period of Gastrodia elata	44.480
	SRR5643660	five period of Gastrodia elata	48.320
	SRR5643661	five period of Gastrodia elata	46.960
	SRR5643662	five period of Gastrodia elata	40.340
	SRR5643663	five period of Gastrodia elata	43.830
	SRR5643664	five period of Gastrodia elata	46.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	47.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	39.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.770
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	49.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	49.280
SRP279888	Gastro	Gastrodia elata tuber	32.99
	Juven	Juvenile tuber	61.39
	Mother_Gastro	Mother tuber of Gastrodia elata	30.89
	Mother_Juven	Mother tuber of Juvenile	42.62