Detail information of GWHGAAEX007709/evm.TU.scaffold_201.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743836392|ref|XP_010936079.1|0PREDICTED: vacuolar protein sorting-associated protein 62-like [Elaeis guineensis]
trEMBLtr|M0SSC5|M0SSC5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26630_001}
TAIRAT3G043500Plant protein of unknown function (DUF946)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208626885629553-
Transcript Sequence

Network for GWHGAAEX007709

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06101.10Vps62525843.20E-246
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.590
SRR2545915Juvenile tuber11.410
SRP108465SRR5643513five period of Gastrodia elata16.930
SRR5643514five period of Gastrodia elata14.740
SRR5643515five period of Gastrodia elata14.160
SRR5643524five period of Gastrodia elata13.350
SRR5643525five period of Gastrodia elata26.270
SRR5643528five period of Gastrodia elata23.750
SRR5643658five period of Gastrodia elata36.860
SRR5643659five period of Gastrodia elata22.800
SRR5643660five period of Gastrodia elata21.270
SRR5643661five period of Gastrodia elata22.410
SRR5643662five period of Gastrodia elata26.650
SRR5643663five period of Gastrodia elata23.700
SRR5643664five period of Gastrodia elata26.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.170
SRR6049655Rhizomagastrodiae_C368-T10_good_115.520
SRR6049656Rhizomagastrodiae_C368-T07_good_115.110
SRR6049657Rhizomagastrodiae_C368-T07_good_116.790
SRR6049658Rhizomagastrodiae_C368-T04_good_113.660
SRR6049659Rhizomagastrodiae_C368-T04_good_113.980
SRR6049660Rhizomagastrodiae_C368-T01_good_114.230
SRR6049661Rhizomagastrodiae_C368-T04_good_112.720
SRR6049662Rhizomagastrodiae_C368-T01_good_112.200
SRR6049663Rhizomagastrodiae_C368-T01_good_112.790
SRR6049664Rhizomagastrodiae_C368-T10_good_120.490
SRR6049665Rhizomagastrodiae_C368-T10_good_120.490
SRP279888GastroGastrodia elata tuber 18.69
JuvenJuvenile tuber23.50
Mother_GastroMother tuber of Gastrodia elata 15.75
Mother_JuvenMother tuber of Juvenile 15.08