Detail information of GWHGAAEX007710/evm.TU.scaffold_201.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694998689|ref|XP_009405762.1|6.30E-138PREDICTED: uncharacterized protein LOC103988834 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RYX0|M0RYX0_MUSAM2.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P11110_001}
TAIRHS75243486.00E-08Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208631299642735-
Transcript Sequence

Network for GWHGAAEX007710

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03908.12Sec201442352.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08497SEC20 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to ER
GO:0005484Molecular FunctionSNAP receptor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.660
SRR2545915Juvenile tuber22.280
SRP108465SRR5643513five period of Gastrodia elata20.230
SRR5643514five period of Gastrodia elata18.380
SRR5643515five period of Gastrodia elata22.530
SRR5643524five period of Gastrodia elata18.420
SRR5643525five period of Gastrodia elata28.530
SRR5643528five period of Gastrodia elata37.940
SRR5643658five period of Gastrodia elata31.410
SRR5643659five period of Gastrodia elata25.530
SRR5643660five period of Gastrodia elata24.460
SRR5643661five period of Gastrodia elata22.100
SRR5643662five period of Gastrodia elata24.210
SRR5643663five period of Gastrodia elata22.580
SRR5643664five period of Gastrodia elata26.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.440
SRR6049655Rhizomagastrodiae_C368-T10_good_123.840
SRR6049656Rhizomagastrodiae_C368-T07_good_122.780
SRR6049657Rhizomagastrodiae_C368-T07_good_138.700
SRR6049658Rhizomagastrodiae_C368-T04_good_178.090
SRR6049659Rhizomagastrodiae_C368-T04_good_187.280
SRR6049660Rhizomagastrodiae_C368-T01_good_134.300
SRR6049661Rhizomagastrodiae_C368-T04_good_160.810
SRR6049662Rhizomagastrodiae_C368-T01_good_136.000
SRR6049663Rhizomagastrodiae_C368-T01_good_129.830
SRR6049664Rhizomagastrodiae_C368-T10_good_130.270
SRR6049665Rhizomagastrodiae_C368-T10_good_130.270
SRP279888GastroGastrodia elata tuber 62.23
JuvenJuvenile tuber17.67
Mother_GastroMother tuber of Gastrodia elata 36.05
Mother_JuvenMother tuber of Juvenile 25.99