Detail information of GWHGAAEX007714/evm.TU.scaffold_201.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|702341492|ref|XP_010056436.1|7.40E-98PREDICTED: putative expansin-B2 [Eucalyptus grandis]
Swissprottr|Q7XT40|EXB15_ORYSJ1.00E-92Expansin-B15 (Precursor)
trEMBLtr|A0A059C5E7|A0A059C5E7_EUCGR3.00E-98Uncharacterized protein {ECO:0000313|EMBL:KCW73165.1}
TAIRAT1G656804.00E-82expansin B2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208860360861405-
Transcript Sequence

Network for GWHGAAEX007714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1711521.00E-18
PF01357.20Pollen_allerg_11642483.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019953Biological Processsexual reproduction
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.130
SRP108465SRR5643513five period of Gastrodia elata1.230
SRR5643514five period of Gastrodia elata1.020
SRR5643515five period of Gastrodia elata0.920
SRR5643524five period of Gastrodia elata0.810
SRR5643525five period of Gastrodia elata1.120
SRR5643528five period of Gastrodia elata0.500
SRR5643658five period of Gastrodia elata1.220
SRR5643659five period of Gastrodia elata1.100
SRR5643660five period of Gastrodia elata0.990
SRR5643661five period of Gastrodia elata1.220
SRR5643662five period of Gastrodia elata0.550
SRR5643663five period of Gastrodia elata1.420
SRR5643664five period of Gastrodia elata0.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.570
SRR6049655Rhizomagastrodiae_C368-T10_good_11.430
SRR6049656Rhizomagastrodiae_C368-T07_good_10.470
SRR6049657Rhizomagastrodiae_C368-T07_good_10.170
SRR6049658Rhizomagastrodiae_C368-T04_good_14.450
SRR6049659Rhizomagastrodiae_C368-T04_good_13.070
SRR6049660Rhizomagastrodiae_C368-T01_good_11.420
SRR6049661Rhizomagastrodiae_C368-T04_good_13.380
SRR6049662Rhizomagastrodiae_C368-T01_good_11.930
SRR6049663Rhizomagastrodiae_C368-T01_good_12.240
SRR6049664Rhizomagastrodiae_C368-T10_good_11.270
SRR6049665Rhizomagastrodiae_C368-T10_good_11.270
SRP279888GastroGastrodia elata tuber 6.31
JuvenJuvenile tuber2.24
Mother_GastroMother tuber of Gastrodia elata 6.12
Mother_JuvenMother tuber of Juvenile 3.66